RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 RHBDD2Q6NTF9 364 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 SBSNQ6UWP8 590 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 RNF44Q7L0R7 432 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 MCATQ8IVS2 390 aaKnown RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 CEP97Q8IW35 865 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 SYTL1Q8IYJ3 562 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 PPFIBP2Q8ND30 876 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 FBF1Q8TES7 1133 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 CT55Q8WUE5 264 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 WBP1Q96G27 269 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 DPH2Q9BQC3 489 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 GPR87Q9BY21 358 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 FUT8Q9BYC5 575 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 SPRTNQ9H040 489 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 AKIRIN1Q9H9L7 192 aaPredicted RBP17.28■□□□□ 0.36
HDAC6-225ENST00000483506 TXNDC16Q9P2K2 825 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 TAC3Q9UHF0 121 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 SRPK3Q9UPE1 567 aa17.28■□□□□ 0.36
HDAC6-225ENST00000483506 ANKRD12Q6UB98 2062 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 KLK3P07288 261 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-225ENST00000483506 CTSBP07858 339 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 YBX1P67809 324 aaKnown RBP17.27■□□□□ 0.36
HDAC6-225ENST00000483506 MC1RQ01726 317 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 DNASE1L3Q13609 305 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF460Q14592 562 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 ZKSCAN8Q15776 578 aaPredicted RBP17.27■□□□□ 0.36
HDAC6-225ENST00000483506 PPP1R3AQ16821 1122 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 GRTP1Q5TC63 336 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF425Q6IV72 752 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 PAQR7Q86WK9 346 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 PROKR1Q8TCW9 393 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 STARD8Q92502 1023 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 TSPAN17Q96FV3 270 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 FMO2Q99518 471 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 PLCD4Q9BRC7 762 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 DPH7Q9BTV6 452 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 PCBD2Q9H0N5 130 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 MRPS30Q9NP92 439 aaKnown RBP17.27■□□□□ 0.36
HDAC6-225ENST00000483506 RALYQ9UKM9 306 aaKnown RBP17.27■□□□□ 0.36
HDAC6-225ENST00000483506 IKZF3Q9UKT9 509 aa17.27■□□□□ 0.36
HDAC6-225ENST00000483506 MTO1Q9Y2Z2 717 aaKnown RBP17.27■□□□□ 0.36
HDAC6-225ENST00000483506 FITM1A5D6W6 292 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 ATXN7O15265 892 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-225ENST00000483506 SRPX2O60687 465 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-225ENST00000483506 HIST1H2AGP0C0S8 130 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-225ENST00000483506 TCN2P20062 427 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 HIST1H2ADP20671 130 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 SPRP35270 261 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-225ENST00000483506 TBPL1P62380 186 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 TCTE1Q5JU00 501 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 YOD1Q5VVQ6 348 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-225ENST00000483506 AGTRAPQ6RW13 159 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 PCSK4Q6UW60 755 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 MBOAT1Q6ZNC8 495 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 CTAGE3PQ8IX95 158 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 PPM1NQ8N819 430 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 ANKRD49Q8WVL7 239 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 CLIP3Q96DZ5 547 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 HIST1H2AHQ96KK5 128 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 GBP5Q96PP8 586 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 HIST1H2AJQ99878 128 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 H2AFJQ9BTM1 129 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 ACAT2Q9BWD1 397 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 SGPP1Q9BX95 441 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 L2HGDHQ9H9P8 463 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 GPAMQ9HCL2 828 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 CCDC177Q9NQR7 707 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-225ENST00000483506 NINJ2Q9NZG7 142 aa17.26■□□□□ 0.35
HDAC6-225ENST00000483506 NRP2O60462 931 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 CAPN1P07384 714 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 RAB40ALP0C0E4 278 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 SAT1P21673 171 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 CCND1P24385 295 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 CDC20Q12834 499 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 ZXDCQ2QGD7 858 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-225ENST00000483506 FAM199XQ6PEV8 388 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-225ENST00000483506 FAM198BQ6UWH4 519 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 ZNF655Q8N720 491 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-225ENST00000483506 OR56A3Q8NH54 315 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 IFT81Q8WYA0 676 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 MR1Q95460 341 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 FBXL8Q96CD0 374 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 CATSPER2Q96P56 530 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 BBC3Q96PG8 261 aaPredicted RBP17.25■□□□□ 0.35
HDAC6-225ENST00000483506 SELENOSQ9BQE4 189 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 TRIM54Q9BYV2 358 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 DERL2Q9GZP9 239 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 CHST8Q9H2A9 424 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 ACSS3Q9H6R3 686 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 ARL15Q9NXU5 204 aa17.25■□□□□ 0.35
HDAC6-225ENST00000483506 UTP6Q9NYH9 597 aaKnown RBP17.25■□□□□ 0.35
HDAC6-225ENST00000483506 MRPS18BQ9Y676 258 aaKnown RBP17.25■□□□□ 0.35
HDAC6-225ENST00000483506 ATRXP46100 2492 aa17.24■□□□□ 0.35
HDAC6-225ENST00000483506 KALRNO60229 2985 aa17.24■□□□□ 0.35
HDAC6-225ENST00000483506 TK2O00142 265 aa17.24■□□□□ 0.35
HDAC6-225ENST00000483506 NKX2-8O15522 239 aa17.24■□□□□ 0.35
HDAC6-225ENST00000483506 ONECUT2O95948 504 aa17.24■□□□□ 0.35
HDAC6-225ENST00000483506 EZRP15311 586 aaKnown RBP17.24■□□□□ 0.35
HDAC6-225ENST00000483506 HRH2P25021 359 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms