RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 IRF9Q00978 393 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 MRPL49Q13405 166 aaKnown RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 LAMB3Q13751 1172 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 TFDP2Q14188 446 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 IQCB1Q15051 598 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 PRKD1Q15139 912 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 NOMO1Q15155 1222 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SLC1A5Q15758 541 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 EIF2S3LQ2VIR3 472 aaKnown RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 EMC4Q5J8M3 183 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SIRPB2Q5JXA9 342 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 PLEKHS1Q5SXH7 462 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 FAM182AQ5T1J6 154 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 VWA5B1Q5TIE3 1220 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 LRRC38Q5VT99 294 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 DUS1LQ6P1R4 473 aaKnown RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF449Q6P9G9 518 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 KDELC1Q6UW63 502 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 CERS6Q6ZMG9 384 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 B4GALNT4Q76KP1 1039 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 DET1Q7L5Y6 550 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 PID1Q7Z2X4 250 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 HOOK3Q86VS8 718 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 RAB43Q86YS6 212 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 RHOT2Q8IXI1 618 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SYTL1Q8IYJ3 562 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 IQCKQ8N0W5 287 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SLC25A41Q8N5S1 370 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 GLIS1Q8NBF1 620 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 ACVR1CQ8NER5 493 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 IPMKQ8NFU5 416 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 OR2L2Q8NH16 312 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SLC35G2Q8TBE7 412 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 HM13Q8TCT9 377 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 ZNF398Q8TD17 642 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 ADAMTS17Q8TE56 1095 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 N4BP2L2Q92802 583 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 DCUN1D1Q96GG9 259 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 FER1L6-AS2Q96M78 137 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 IP6K3Q96PC2 410 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 VAT1Q99536 393 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SMAD5Q99717 465 aaKnown RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 FERMT1Q9BQL6 677 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 CCM2Q9BSQ5 444 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 FSD1LQ9BXM9 530 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 TLR10Q9BXR5 811 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 PACSIN1Q9BY11 444 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 WWP1Q9H0M0 922 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SRMSQ9H3Y6 488 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 ACTR5Q9H9F9 607 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 UGT1A7Q9HAW7 530 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 UGT1A10Q9HAW8 530 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 UGT1A8Q9HAW9 530 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 ZNHIT6Q9NWK9 470 aaKnown RBP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 LUZP4Q9P127 313 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SERTAD3Q9UJW9 196 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 POMT2Q9UKY4 750 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 NENFQ9UMX5 172 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 SRPK3Q9UPE1 567 aa5.69□□□□□ -1.5
CSDE1-207ENST00000483407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.69□□□□□ -1.5
CSDE1-207ENST00000483407 NBPF19A0A087WUL8 3843 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 FITM1A5D6W6 292 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 SLC9B1P1A6NJY1 282 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 C3orf70A6NLC5 250 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 E7EQ34 232 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 IFRD1O00458 451 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 PEX12O00623 359 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 BUD23O43709 281 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 SPOPO43791 374 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CST8O60676 142 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 SRP72O76094 671 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 IPO13O94829 963 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 GYPCP04921 128 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 POLBP06746 335 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CD63P08962 238 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 TNNT1P13805 278 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 HNRNPH3P31942 346 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 RORAP35398 523 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 HADHAP40939 763 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 KPNA2P52292 529 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ITGA1P56199 1179 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 WASHC5Q12768 1159 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ABRQ12979 859 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 MPP3Q13368 585 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 NCF4Q15080 339 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 TERF2Q15554 542 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 KYNUQ16719 465 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 BCL7AQ4VC05 210 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 PRR30Q53SZ7 412 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ZRANB3Q5FWF4 1079 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 PRAMEF17Q5VTA0 474 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 LYPLAL1Q5VWZ2 237 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 KAZNQ674X7 775 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CAVIN1Q6NZI2 390 aaKnown RBP5.68□□□□□ -1.5
CSDE1-207ENST00000483407 FBXO38Q6PIJ6 1188 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ZBTB46Q86UZ6 589 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 LUZP1Q86V48 1076 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 CFAP206Q8IYR0 622 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 GPR135Q8IZ08 494 aa5.68□□□□□ -1.5
CSDE1-207ENST00000483407 ZBTB2Q8N680 514 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms