RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CPNE5Q9HCH3 593 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 MRPS30Q9NP92 439 aaKnown RBP9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 UTP6Q9NYH9 597 aaKnown RBP9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 TAC3Q9UHF0 121 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 ADAMTS6Q9UKP5 1117 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 BTRCQ9Y297 605 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 IKBKGQ9Y6K9 419 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 IGSF10Q6WRI0 2623 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 FREM2Q5SZK8 3169 aa9.63□□□□□ -0.87
SPTLC1-206ENST00000482632 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CELSR3Q9NYQ7 3312 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CCDC88CQ9P219 2028 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 A0A087WV48 116 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CYSRT1A8MQ03 144 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 E7EQ34 232 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 POC1B-GALNT4F8VUJ3 575 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 MYO1CO00159 1063 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CCNDBP1O95273 360 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 TIAF1O95411 115 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 FGF5P12034 268 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 STMN1P16949 149 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ZNF37AP17032 561 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 GRIA3P42263 894 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 UCNP55089 124 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ITGA1P56199 1179 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 POU4F1Q01851 419 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 SP140Q13342 867 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 NAB1Q13506 487 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 BMPR2Q13873 1038 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ZIC1Q15915 447 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 UBAP2Q5T6F2 1119 aaKnown RBP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 GRTP1Q5TC63 336 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 PRAMEF17Q5VTA0 474 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 KIAA1614Q5VZ46 1190 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CEP97Q8IW35 865 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 SPATA6LQ8N4H0 392 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 NKAPQ8N5F7 415 aaKnown RBP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ESX1Q8N693 406 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ZSCAN1Q8NBB4 408 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 OR1L3Q8NH93 324 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 EXT2Q93063 718 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ZNF501Q96CX3 271 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 TCTN2Q96GX1 697 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 MENTQ9BUN1 341 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 PITPNM3Q9BZ71 974 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 B3GNT4Q9C0J1 378 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ATG10Q9H0Y0 220 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 GPN2Q9H9Y4 310 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 SYTL2Q9HCH5 934 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 FAM60AQ9NP50 221 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CCDC177Q9NQR7 707 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 ARL15Q9NXU5 204 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 SEMA5BQ9P283 1151 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 CTNNAL1Q9UBT7 734 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 SERTAD3Q9UJW9 196 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 PDE10AQ9Y233 779 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 NAV2Q8IVL1 2488 aa9.62□□□□□ -0.87
SPTLC1-206ENST00000482632 A0A0J9YVX5 310 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 NCF1BA6NI72 391 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 NCF1CA8MVU1 366 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 GFYI3L273 518 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CDC7O00311 574 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 SLC16A5O15375 505 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CPNE3O75131 537 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 KATNA1O75449 491 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 OR2B3O76000 313 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 EIF2S1P05198 315 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 INHBAP08476 426 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 NCF1P14598 390 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 IMPA1P29218 277 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 HSD17B2P37059 387 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 TBPL1P62380 186 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 ILF2Q12905 390 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CBLBQ13191 982 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 NAE1Q13564 534 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CSHL1Q14406 222 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 ARHGAP19Q14CB8 494 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CYP2A13Q16696 494 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 PHKG1Q16816 387 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 MROH9Q5TGP6 573 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 TMEM207Q6UWW9 146 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 TIPARPQ7Z3E1 657 aaKnown RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CMC1Q7Z7K0 106 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 OR2L3Q8NG85 312 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 OR8K5Q8NH50 307 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 FLVCR1-AS1Q8TAF5 88 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 ZNF480Q8WV37 535 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 DLG3Q92796 817 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 MR1Q95460 341 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 NKD1Q969G9 470 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CCDC138Q96M89 665 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 CYTH2Q99418 400 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 GPR22Q99680 433 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 DPH7Q9BTV6 452 aa9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 SPRTNQ9H040 489 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-206ENST00000482632 STOX2Q9P2F5 926 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms