RNA–Protein interactions for RNA: ENST00000482496.5

PDZD8-202, Transcript of PDZ domain containing 8, humanhuman

TSL 2

Gene PDZD8, Length 1,400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-202ENST00000482496 TMEM18Q96B42 140 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 ELSPBP1Q96BH3 223 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 RSRC1Q96IZ7 334 aaKnown RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 ZNF778Q96MU6 729 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 CCDC43Q96MW1 224 aaKnown RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 BARD1Q99728 777 aaKnown RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 TSG101Q99816 390 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 CHCHD6Q9BRQ6 235 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 TRMT61BQ9BVS5 477 aaKnown RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 NFKBIZQ9BYH8 718 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 FGFBP2Q9BYJ0 223 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 CDT1Q9H211 546 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 PLEKHA4Q9H4M7 779 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 MRPL17Q9NRX2 175 aaKnown RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 DMAC2Q9NW81 257 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 HCFC1R1Q9NWW0 138 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 NCKIPSDQ9NZQ3 722 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 DNAJB4Q9UDY4 337 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 LIMA1Q9UHB6 759 aaKnown RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 ZNF215Q9UL58 517 aaPredicted RBP3.3□□□□□ -1.88
PDZD8-202ENST00000482496 MKLN1Q9UL63 735 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 NFE2L3Q9Y4A8 694 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 NBEAL2Q6ZNJ1 2754 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 DCHS2Q6V1P9 2916 aa3.3□□□□□ -1.88
PDZD8-202ENST00000482496 TGP01266 2768 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 TRIM49BA6NDI0 452 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 GAGE12JA6NER3 117 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 HSPB2A8KAH6 182 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 KDM4EB2RXH2 506 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 E9PAM4 449 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 H3BNX3 289 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 IFNL4K9M1U5 179 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 EBAG9O00559 213 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 CETN3O15182 167 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 SLC16A4O15374 487 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 BCAT2O15382 392 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 CALUO43852 315 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 HNRNPCL1O60812 293 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 TIPRLO75663 272 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 SEC14L2O76054 403 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 CCNDBP1O95273 360 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 GCNT3O95395 438 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ADCY5O95622 1261 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 CYP1A2P05177 515 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 CLEC3BP05452 202 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 HEXAP06865 529 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 RNF224P0DH78 156 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 NMT1P30419 496 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 DEKP35659 375 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 SLC11A1P49279 550 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ZNF81P51508 661 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ATXN3P54252 364 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 PEX3P56589 373 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 STX17P56962 302 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 PTENP60484 403 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ARF3P61204 181 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ARF1P84077 181 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 TMEM115Q12893 351 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 GRIK3Q13003 919 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 PRKG2Q13237 762 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 DMP1Q13316 513 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ERV3-1Q14264 604 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 FRG1Q14331 258 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 RNPS1Q15287 305 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 KRT31Q15323 416 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 HSPB2Q16082 182 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 TPD52L1Q16890 204 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 SLC45A4Q5BKX6 768 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 TCP11X2Q5H9J9 407 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 FAM78AQ5JUQ0 283 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 DCAF12L2Q5VW00 463 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 KLHL10Q6JEL2 608 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 VITQ6UXI7 678 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 GSTA5Q7RTV2 222 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ZNF410Q86VK4 478 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ERICH1Q86X53 443 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ECHDC2Q86YB7 292 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 NAXDQ8IW45 347 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 DENND6AQ8IWF6 608 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 PARP16Q8N5Y8 322 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 CSGALNACT2Q8N6G5 542 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 FRMD1Q8N878 549 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 LSMEM1Q8N8F7 131 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 Q8N9P0 234 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 TMEM161BQ8NDZ6 487 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 C7orf57Q8NEG2 295 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 GABPB2Q8TAK5 448 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 PSPC1Q8WXF1 523 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ANP32BQ92688 251 aaKnown RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 INPP5DQ92835 1189 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 OTULINQ96BN8 352 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 IFT74Q96LB3 600 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 APOLD1Q96LR9 279 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 ACCSQ96QU6 501 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 PI4K2AQ9BTU6 479 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 C1QTNF7Q9BXJ2 289 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 POLR3FQ9H1D9 316 aaPredicted RBP3.29□□□□□ -1.88
PDZD8-202ENST00000482496 C2orf40Q9H1Z8 148 aa3.29□□□□□ -1.88
PDZD8-202ENST00000482496 KLHL31Q9H511 634 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms