RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	HAPLN1	P10915	354 aa	Predicted RBP	2.58	□□□□□ -2
CCNL1-223	ENST00000481173	RPL35A	P18077	110 aa	Known RBP	2.58	□□□□□ -2
CCNL1-223	ENST00000481173	PDHA2	P29803	388 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	SOX3	P41225	446 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	STAT2	P52630	851 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	HNRNPK	P61978	463 aa	Known RBP eCLIP	2.58	□□□□□ -2
CCNL1-223	ENST00000481173	TRA2B	P62995	288 aa	Known RBP	2.58	□□□□□ -2
CCNL1-223	ENST00000481173	CDH18	Q13634	790 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	FAM189A2	Q15884	450 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	NUP54	Q7Z3B4	507 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	ADGRA1	Q86SQ6	560 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	SLC47A2	Q86VL8	602 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	LINC00346	Q8IVM7	164 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	SLC37A3	Q8NCC5	494 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	LRRC15	Q8TF66	581 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	SLAMF9	Q96A28	289 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	NXNL1	Q96CM4	212 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	FAM218A	Q96MZ4	157 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	BARD1	Q99728	777 aa	Known RBP	2.58	□□□□□ -2
CCNL1-223	ENST00000481173	GHITM	Q9H3K2	345 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	HAUS2	Q9NVX0	235 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	ZNF510	Q9Y2H8	683 aa		2.58	□□□□□ -2
CCNL1-223	ENST00000481173	WBP11	Q9Y2W2	641 aa	Known RBP	2.58	□□□□□ -2
CCNL1-223	ENST00000481173	ZNF646	O15015	1829 aa	Predicted RBP	2.57	□□□□□ -2
CCNL1-223	ENST00000481173	LOC105371242	A0A075B767	164 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	KLLN	B2CW77	178 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	PHOX2A	O14813	284 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	ENTPD3	O75355	529 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	POP4	O95707	220 aa	Known RBP	2.57	□□□□□ -2
CCNL1-223	ENST00000481173	DANCR	P0C864	163 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	CAPN3	P20807	821 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	OXTR	P30559	389 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	CLCN4	P51793	760 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	MAPK12	P53778	367 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	TMEM132D	Q14C87	1099 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	MCMDC2	Q4G0Z9	681 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	LEKR1	Q6ZMV7	388 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	GDPGP1	Q6ZNW5	385 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	C1orf122	Q6ZSJ8	110 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	SLC34A3	Q8N130	599 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	OR7A2P	Q8NGA2	310 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	SPACA9	Q96E40	222 aa	Predicted RBP	2.57	□□□□□ -2
CCNL1-223	ENST00000481173	LPAR4	Q99677	370 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	NYX	Q9GZU5	481 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	MYNN	Q9NPC7	610 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	CHST11	Q9NPF2	352 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	ADD3	Q9UEY8	706 aa	Known RBP	2.57	□□□□□ -2
CCNL1-223	ENST00000481173	RNF150	Q9ULK6	438 aa		2.57	□□□□□ -2
CCNL1-223	ENST00000481173	RSF1	Q96T23	1441 aa	Predicted RBP	2.57	□□□□□ -2
CCNL1-223	ENST00000481173	LOC100509620	A0A075B734	347 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	NEMP2	A6NFY4	417 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173		A8MV72	311 aa	Predicted RBP	2.56	□□□□□ -2
CCNL1-223	ENST00000481173	SHISA9	B4DS77	424 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	ARPC2	O15144	300 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	IPO8	O15397	1037 aa	Known RBP	2.56	□□□□□ -2
CCNL1-223	ENST00000481173	FOLR2	P14207	255 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	GP9	P14770	177 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	SAT1	P21673	171 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	HOXD13	P35453	343 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	CAPG	P40121	348 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	NAP1L1	P55209	391 aa	Known RBP	2.56	□□□□□ -2
CCNL1-223	ENST00000481173	VEZF1	Q14119	521 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	SNAPC1	Q16533	368 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	C15orf32	Q32M92	178 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	HIGD2B	Q4VC39	106 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	SEL1L3	Q68CR1	1132 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	MFSD12	Q6NUT3	480 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	NOTUM	Q6P988	496 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	CHMP1B	Q7LBR1	199 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	KLHDC1	Q8N7A1	406 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	APPL2	Q8NEU8	664 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	SLC22A18	Q96BI1	424 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	PTER	Q96BW5	349 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	C4orf45	Q96LM5	186 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	C2orf48	Q96LS8	159 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	TIGD1	Q96MW7	591 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	SDF4	Q9BRK5	362 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	HOXD1	Q9GZZ0	328 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	HEXA-AS1	Q9H8Q6	139 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	THAP10	Q9P2Z0	257 aa	Predicted RBP	2.56	□□□□□ -2
CCNL1-223	ENST00000481173	CTSZ	Q9UBR2	303 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	ABT1	Q9ULW3	272 aa	Known RBP	2.56	□□□□□ -2
CCNL1-223	ENST00000481173	WDR83OS	Q9Y284	106 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173	ARID2	Q68CP9	1835 aa		2.56	□□□□□ -2
CCNL1-223	ENST00000481173		A0A087WUV0	522 aa	Predicted RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	FSD2	A1L4K1	749 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	NPIPB9	F8W1W9	429 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173		H0YAE9	185 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	TFEC	O14948	347 aa	Predicted RBP	2.55	□□□□□ -2
CCNL1-223	ENST00000481173	TEX28	O15482	410 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	LRCH4	O75427	683 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	MELTF	P08582	738 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CSH1	P0DML2	217 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CSH2	P0DML3	217 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	PFKFB1	P16118	471 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	IL4R	P24394	825 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	CD27	P26842	260 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	ETV5	P41161	510 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	MTHFR	P42898	656 aa		2.55	□□□□□ -2
CCNL1-223	ENST00000481173	DNA2	P51530	1060 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms