RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 GNGT1P63211 74 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CDKL1Q00532 357 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CLCQ05315 142 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 NR0B2Q15466 257 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PDK4Q16654 411 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ARL13AQ5H913 290 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 PERM1Q5SV97 790 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CATSPEREQ5SY80 951 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 FAM92BQ6ZTR7 304 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 KIAA2013Q8IYS2 634 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ADGRF3Q8IZF5 1079 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 FBXO15Q8NCQ5 510 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 CKAP2Q8WWK9 683 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 NEIL2Q969S2 332 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PPP1R36Q96LQ0 422 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 KCNA7Q96RP8 456 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CAPS2Q9BXY5 557 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 GSTO2Q9H4Y5 243 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 SLC32A1Q9H598 525 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 TNFRSF12AQ9NP84 129 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 MID1IP1Q9NPA3 183 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 OGFRQ9NZT2 677 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ATXN7L1Q9ULK2 861 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 TNPO3Q9Y5L0 923 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 WDFY3Q8IZQ1 3526 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ZNF292O60281 2723 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 LY6G6EA0A0G2JKS1 128 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 A0A1W2PPV9 198 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 A8MU76 341 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 STX16-NPEPL1H3BU86 382 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 H7BY64 318 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 STX16O14662 325 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 FFAR3O14843 346 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 GPR42O15529 346 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 B4GAT1O43505 415 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 NUDT21O43809 227 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 KIF1CO43896 1103 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 KDM1AO60341 852 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 SERPINE1P05121 402 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CD59P13987 128 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PVRP15151 417 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 VARSP26640 1264 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 SERPINB3P29508 390 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PEBP1P30086 187 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 GRK6P43250 576 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 SLC6A12P48065 614 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ABCE1P61221 599 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 SH3BP2P78314 561 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 NFKB2Q00653 900 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PRKAA1Q13131 559 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PCBP2Q15366 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
HERC4-210ENST00000480158 CYP2A13Q16696 494 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 SGO1Q5FBB7 561 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 XKR6Q5GH73 641 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 PRAMEF13Q5VWM6 474 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CLEC6AQ6EIG7 209 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ARMC6Q6NXE6 501 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 EFL1Q7Z2Z2 1120 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 TMPRSS11BQ86T26 416 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 C17orf82Q86X59 251 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 PLD3Q8IV08 490 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 LRRC56Q8IYG6 542 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 TCAIMQ8N3R3 496 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 OR2L8Q8NGY9 312 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 OR56A3Q8NH54 315 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 SMPDL3AQ92484 453 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 MTFMTQ96DP5 389 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 L3HYPDHQ96EM0 354 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CNDP2Q96KP4 475 aaKnown RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 PRAP1Q96NZ9 151 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 TGM7Q96PF1 710 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 HBEGFQ99075 208 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CCDC3Q9BQI4 270 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ACTR8Q9H981 624 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 DNAJC11Q9NVH1 559 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CUEDC1Q9NWM3 386 aaPredicted RBP6.2□□□□□ -1.42
HERC4-210ENST00000480158 OR6C2Q9NZP2 312 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 ADAM21Q9UKJ8 722 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 TIMM22Q9Y584 194 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 U3KQA8 63 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 RALGAPA1Q6GYQ0 2036 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 OTOGLQ3ZCN5 2332 aa6.2□□□□□ -1.42
HERC4-210ENST00000480158 CCDC189A1A4V9 331 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 OR5K3A6NET4 321 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 OR7A17O14581 309 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 CAPN5O15484 640 aaPredicted RBP6.19□□□□□ -1.42
HERC4-210ENST00000480158 PRAMEF4O60810 478 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 SH3BGRLO75368 114 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 RASSF9O75901 435 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 OR4F21O95013 312 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 LDOC1O95751 146 aaPredicted RBP6.19□□□□□ -1.42
HERC4-210ENST00000480158 STATHP02808 62 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 PROS1P07225 676 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 RPS17P08708 135 aaKnown RBP6.19□□□□□ -1.42
HERC4-210ENST00000480158 CDH1P12830 882 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 EPORP19235 508 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 GGT5P36269 586 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 CCNG1P51959 295 aa6.19□□□□□ -1.42
HERC4-210ENST00000480158 FOXA1P55317 472 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms