RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 NPFFR2Q9Y5X5 522 aa11.19□□□□□ -0.62
USP11-208ENST00000480104 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 HYKKA2RU49 373 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 SERINC4A6NH21 518 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 ISM1B1AKI9 464 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 IFRD1O00458 451 aaPredicted RBP11.18□□□□□ -0.62
USP11-208ENST00000480104 DDX3XO00571 662 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP11-208ENST00000480104 SGTAO43765 313 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 CD5LO43866 347 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 F13A1P00488 732 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 CALB1P05937 261 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 PTH2RP49190 550 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 ZNF135P52742 658 aaPredicted RBP11.18□□□□□ -0.62
USP11-208ENST00000480104 NR1H2P55055 460 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 VSX2P58304 361 aaPredicted RBP11.18□□□□□ -0.62
USP11-208ENST00000480104 BECN1Q14457 450 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 FIGNQ5HY92 759 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 DCUN1D2Q6PH85 259 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 ZNF677Q86XU0 584 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 LINC00615Q96LM1 132 aaPredicted RBP11.18□□□□□ -0.62
USP11-208ENST00000480104 CSPG4P5Q96PW8 444 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 PCDHB18PQ96TA0 734 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 GSX2Q9BZM3 304 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 DEFB127Q9H1M4 99 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 CDC42EP3Q9UKI2 254 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 SCN2AQ99250 2005 aa11.18□□□□□ -0.62
USP11-208ENST00000480104 RNF223E7ERA6 249 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 F8VZ95 297 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 MATN3O15232 486 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 SMC2O95347 1197 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 C8orf89P0DMQ9 161 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 ZSCAN22P10073 491 aaPredicted RBP11.17□□□□□ -0.62
USP11-208ENST00000480104 BMP5P22003 454 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 PSMA2P25787 234 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 PDHA2P29803 388 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 SERPINB6P35237 376 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 ARL4AP40617 200 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 WASHC2DQ5SRD0 308 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 RIPPLY2Q5TAB7 128 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 MON1BQ7L1V2 547 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 POLNQ7Z5Q5 900 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 PHF13Q86YI8 300 aaPredicted RBP11.17□□□□□ -0.62
USP11-208ENST00000480104 CREBRFQ8IUR6 639 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 SLC5A8Q8N695 610 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 OR5AR1Q8NGP9 310 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 C16orf52Q8NHV5 167 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 CREB3L4Q8TEY5 395 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 SMARCE1Q969G3 411 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 C10orf90Q96M02 699 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 OR6C2Q9NZP2 312 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 AMACRQ9UHK6 382 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 KLF13Q9Y2Y9 288 aaPredicted RBP11.17□□□□□ -0.62
USP11-208ENST00000480104 WNK1Q9H4A3 2382 aa11.17□□□□□ -0.62
USP11-208ENST00000480104 GAPDHSO14556 408 aaPredicted RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 TPBGLP0DKB5 382 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 CFPP27918 469 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 MIPP30301 263 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 KIR2DS3Q14952 304 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 ZC3H12BQ5HYM0 836 aaKnown RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 FKBP15Q5T1M5 1219 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 C1orf185Q5T7R7 199 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 KIF18BQ86Y91 864 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 LRRC49Q8IUZ0 686 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 SMPDL3BQ92485 455 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 TFGQ92734 400 aaPredicted RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 KIAA1191Q96A73 305 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 SMC6Q96SB8 1091 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 ZFYVE21Q9BQ24 234 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 ADAM19Q9H013 955 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 COG4Q9H9E3 785 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 HAUS2Q9NVX0 235 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 SMOXQ9NWM0 555 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 MTRF1LQ9UGC7 380 aaKnown RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 FOXD3Q9UJU5 478 aaPredicted RBP11.16□□□□□ -0.62
USP11-208ENST00000480104 PLAGL1Q9UM63 463 aa11.16□□□□□ -0.62
USP11-208ENST00000480104 GLYATL1P3A0A0U1RQE8 302 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
USP11-208ENST00000480104 FAM47E-STBD1D6RA91 191 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 BCKDKO14874 412 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 PEX1O43933 1283 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 MFSD11O43934 449 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 SOX30O94993 753 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 EGR1P18146 543 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 PPP1R2P41236 205 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 CD151P48509 253 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 ITGA8P53708 1063 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 GPR85P60893 370 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 CLEC16AQ2KHT3 1053 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 C8orf34Q49A92 452 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 CPEB2Q7Z5Q1 589 aaKnown RBP11.15□□□□□ -0.62
USP11-208ENST00000480104 ZC3H7AQ8IWR0 971 aaKnown RBP11.15□□□□□ -0.62
USP11-208ENST00000480104 AMER3Q8N944 861 aa11.15□□□□□ -0.62
USP11-208ENST00000480104 DTX3LQ8TDB6 740 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms