RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 HRH2P25021 359 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 MPSTP25325 297 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 RPL10P27635 214 aaKnown RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 TYK2P29597 1187 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 CRHR1P34998 444 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 RAB15P59190 212 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 NAA30Q147X3 362 aaPredicted RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 SLC5A12Q1EHB4 618 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 KLC3Q6P597 504 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 CYB5D1Q6P9G0 228 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 TBC1D1Q86TI0 1168 aaPredicted RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 ISCA2Q86U28 154 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 TRABD2AQ86V40 505 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 OOSP2Q86WS3 158 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 PLXDC1Q8IUK5 500 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 TRIM48Q8IWZ4 208 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 OR9A1PQ8NGU1 263 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 STAG3L4Q8TBR4 150 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 RDH11Q8TC12 318 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 DENND1AQ8TEH3 1009 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 ANKRD49Q8WVL7 239 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 DLG3Q92796 817 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 TEFMQ96QE5 360 aaKnown RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 MRPL57Q9BQC6 102 aaKnown RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 ZPBPQ9BS86 351 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 SGPP1Q9BX95 441 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 PITHD1Q9GZP4 211 aaPredicted RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 IGSF5Q9NSI5 407 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 IMP3Q9NV31 184 aaKnown RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 SLC39A1Q9NY26 324 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 KCNK4Q9NYG8 393 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 NUDT4Q9NZJ9 180 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 OGFRQ9NZT2 677 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 AKAP7Q9P0M2 348 aaPredicted RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 COPG2Q9UBF2 871 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 TLK1Q9UKI8 766 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 POMT2Q9UKY4 750 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 PLAAQ9Y263 795 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 BTRCQ9Y297 605 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 ITPR2Q14571 2701 aa8.6□□□□□ -1.03
DDX56-211ENST00000479602 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
DDX56-211ENST00000479602 LOC101059948A0A1B0GTJ6 334 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 E7ENX8 843 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 H3BQF6 201 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 STX16-NPEPL1H3BU86 382 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 AGRPO00253 132 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 STX16O14662 325 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 RAD1O60671 282 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 GLRA3O75311 464 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 UBXN7O94888 489 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 RECKO95980 971 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 CCDC166P0CW27 439 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 MAP4P27816 1152 aaKnown RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 GSTM2P28161 218 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 PBLDP30039 288 aaPredicted RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 CSTF2P33240 577 aaKnown RBP eCLIP8.59□□□□□ -1.03
DDX56-211ENST00000479602 SLC6A12P48065 614 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 ABATP80404 500 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 TAP2Q03519 686 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 MAP7Q14244 749 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 CASP8Q14790 479 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 TGFBIQ15582 683 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 TECRLQ5HYJ1 363 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 COLEC12Q5KU26 742 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 C10orf62Q5T681 223 aaPredicted RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 DCAF12Q5T6F0 453 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 MROH9Q5TGP6 573 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 SULT1C3Q6IMI6 304 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 BORAQ6PGQ7 559 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 UBE2R2Q712K3 238 aaPredicted RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 PIWIL4Q7Z3Z4 852 aaKnown RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 BPHLQ86WA6 291 aaPredicted RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 AMIGO1Q86WK6 493 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 ADGRF3Q8IZF5 1079 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 CACNA2D3Q8IZS8 1091 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 TMEM151AQ8N4L1 468 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 LMNTD1Q8N9Z9 388 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 OR5AR1Q8NGP9 310 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 OR56A3Q8NH54 315 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 FLVCR1-AS1Q8TAF5 88 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 JPH3Q8WXH2 748 aaPredicted RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 SMPDL3AQ92484 453 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 ZDHHC12Q96GR4 267 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 SLC41A2Q96JW4 573 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 SLC38A3Q99624 504 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 SH3GL2Q99962 352 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 TRIM54Q9BYV2 358 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 MRPL46Q9H2W6 279 aaKnown RBP8.59□□□□□ -1.03
DDX56-211ENST00000479602 EHD1Q9H4M9 534 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 C1GALT1Q9NS00 363 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 GPRC5BQ9NZH0 403 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 DCDC2Q9UHG0 476 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 LNPEPQ9UIQ6 1025 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 MID2Q9UJV3 735 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 ICKQ9UPZ9 632 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 PDE10AQ9Y233 779 aa8.59□□□□□ -1.03
DDX56-211ENST00000479602 TRBV23OR9-2A0A075B6M9 112 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms