RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 EIF2B5Q13144 721 aaKnown RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 NDUFAF6Q330K2 333 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 GALNT13Q8IUC8 556 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 VANGL1Q8TAA9 524 aaPredicted RBP13.98□□□□□ -0.17
COL20A1-206ENST00000479501 C1GALT1C1Q96EU7 318 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 CEP295NLQ96MC4 621 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 PTGDR2Q9Y5Y4 395 aa13.98□□□□□ -0.17
COL20A1-206ENST00000479501 NPPAP01160 153 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 RFC2P35250 354 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 SH3BP2P78314 561 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 CST9Q5W186 159 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 FAM91A1Q658Y4 838 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 DPY19L3Q6ZPD9 716 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 OR5K1Q8NHB7 308 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ZUFSPQ96AP4 578 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 BIRC7Q96CA5 298 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 NUS1Q96E22 293 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 CCM2Q9BSQ5 444 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF282Q9UDV7 671 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 PLK4O00444 970 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 TEX28O15482 410 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 PRSS56P0CW18 603 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ADH5P11766 374 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 MAGEA3P43357 314 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 YAP1P46937 504 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 PTPN5P54829 565 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 SLBPQ14493 270 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 BICRALQ6AI39 1079 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 XKR5Q6UX68 686 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 C1orf52Q8N6N3 182 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 PIK3C3Q8NEB9 887 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 IRF7Q92985 503 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 UTP4Q969X6 686 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 MGME1Q9BQP7 344 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 KAT8Q9H7Z6 458 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 IGSF5Q9NSI5 407 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 CCDC59Q9P031 241 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 NDOR1Q9UHB4 597 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ADAMTS6Q9UKP5 1117 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 TESMINQ9Y4I5 508 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 PSIP1O75475 530 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 DHFRP00374 187 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 PSMA1P25786 263 aaKnown RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 RCVRNP35243 200 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 GALNT1Q10472 559 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 TMEM126BQ8IUX1 230 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 SLC43A3Q8NBI5 491 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 SCAMP4Q969E2 229 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF641Q96N77 438 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 SLC38A2Q96QD8 506 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ARNT2Q9HBZ2 717 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 ZSCAN32Q9NX65 697 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 SPO11Q9Y5K1 396 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
COL20A1-206ENST00000479501 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
COL20A1-206ENST00000479501 TGFB1P01137 390 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 PPP1R8Q12972 351 aaKnown RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 NANOGP8Q6NSW7 305 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 GRASPQ7Z6J2 395 aaPredicted RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 TMBIM1Q969X1 311 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 NANOGQ9H9S0 305 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 TMED5Q9Y3A6 229 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 ACTL7AQ9Y615 435 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 SMCHD1A6NHR9 2005 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 COL24A1Q17RW2 1714 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 IGFBP4P22692 258 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 SCN1BQ07699 218 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 HKDC1Q2TB90 917 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 THOC6Q86W42 341 aaKnown RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 MMAAQ8IVH4 418 aaKnown RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 TTC29Q8NA56 475 aaPredicted RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 PIH1D2Q8WWB5 315 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 MARCH7Q9H992 704 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 ABCB9Q9NP78 766 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 POLE3Q9NRF9 147 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 AASDHPPTQ9NRN7 309 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 CARD8Q9Y2G2 431 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 SAP18O00422 153 aaKnown RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 CDH12P55289 794 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 FPGSQ05932 587 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 C6orf183Q5T699 404 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 PDE12Q6L8Q7 609 aaKnown RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 VITQ6UXI7 678 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 DIRAS2Q96HU8 199 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 TREX1Q9NSU2 369 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 PEX16Q9Y5Y5 336 aa13.96□□□□□ -0.17
COL20A1-206ENST00000479501 XIRP1Q702N8 1843 aaKnown RBP13.96□□□□□ -0.17
COL20A1-206ENST00000479501 KIAA0100Q14667 2235 aaKnown RBP13.96□□□□□ -0.18
COL20A1-206ENST00000479501 CAPN14A8MX76 684 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 SLC31A1O15431 190 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 LATS1O95835 1130 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 CCNYL3P0C7X3 344 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 CSF2RAP15509 400 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 ENGP17813 658 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 C1QTNF8P60827 252 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 SPATS1Q496A3 300 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 IFI44LQ53G44 452 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms