RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 PCDHA3Q9Y5H8 950 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 NPFFR2Q9Y5X5 522 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 A0A1B0GVI7 797 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 A0A1W2PPK0 400 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SSU72P8A0A1W2PR75 194 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TOX4O94842 621 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SUB1P53999 127 aaKnown RBP eCLIP5.32□□□□□ -1.56
USF3-202ENST00000478658 CDK6Q00534 326 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PTPRCAPQ14761 206 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 WDR45BQ5MNZ6 344 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 AKR1C8PQ5T2L2 129 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 VSTM4Q8IW00 320 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RASGEF1CQ8N431 466 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 KDF1Q8NAX2 398 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 ZNF540Q8NDQ6 660 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR4A15Q8NGL6 344 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CHTF18Q8WVB6 975 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ATXN7L3BQ96GX2 97 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 DPYSL5Q9BPU6 564 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 NDC1Q9BTX1 674 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 EGLN3Q9H6Z9 239 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 XPNPEP1Q9NQW7 623 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ZNHIT2Q9UHR6 403 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 R3HDM2Q9Y2K5 976 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 GPSM3Q9Y4H4 160 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TEX13DA0A0J9YY54 714 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 M0QX08 132 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RDH16O75452 317 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TAS2R39P59534 338 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RAB4BP61018 213 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TGFBR3Q03167 851 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PTPN11Q06124 597 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 TOR1AIP1Q5JTV8 583 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PRAMEF13Q5VWM6 474 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 FITM2Q8N6M3 262 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR4E2Q8NGC2 313 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 NTPCRQ9BSD7 190 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 HEMGNQ9BXL5 484 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PCTPQ9UKL6 214 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 LINC00854A0A1B0GVQ3 168 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 FANCGO15287 622 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TEX33O43247 280 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 DEDDO75618 318 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 EYA4O95677 639 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ITGAVP06756 1048 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SFTPBP07988 381 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MMP2P08253 660 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ANXA7P20073 488 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 HNRNPFP52597 415 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 TCTAP57738 103 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 GRIK5Q16478 980 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 LRRC73Q5JTD7 316 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 LYSMD4Q5XG99 296 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 FRMD7Q6ZUT3 714 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 C16orf78Q8WTQ4 265 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SELENOMQ8WWX9 145 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ZBED6CLQ96FA7 236 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 METTL5Q9NRN9 209 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 MKS1Q9NXB0 559 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 UBQLN2Q9UHD9 624 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MOB4Q9Y3A3 225 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 HSPE1-MOB4S4R3N1 261 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 LOC105369274A0A096LPK9 316 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 HMX3A6NHT5 357 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CHRNA1P02708 482 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 C9P02748 559 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 VDRP11473 427 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 HNF1AP20823 631 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PRPS1L1P21108 318 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 DGKQP52824 942 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 EPHA5P54756 1037 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TBX4P57082 545 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SP2Q02086 613 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MVKQ03426 396 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MAP2K5Q13163 448 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 GK3PQ14409 553 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TMEM53Q6P2H8 277 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 CDH26Q8IXH8 852 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR4N4Q8N0Y3 316 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 SLC25A41Q8N5S1 370 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OR8J1Q8NGP2 316 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 NAT14Q8WUY8 206 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RPL10LQ96L21 214 aaKnown RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 SFXN2Q96NB2 322 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ADAM2Q99965 735 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 ATP13A1Q9HD20 1204 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 RNF146Q9NTX7 359 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 GLTPQ9NZD2 209 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MAT2BQ9NZL9 334 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 MAB21L2Q9Y586 359 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 TMEM14AQ9Y6G1 99 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PRAMEF33A0A0G2JMD5 474 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 PRAMEF10O60809 474 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 USP2O75604 605 aaPredicted RBP5.32□□□□□ -1.56
USF3-202ENST00000478658 AKAP3O75969 853 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 GLCEO94923 617 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 OAZ2O95190 189 aa5.32□□□□□ -1.56
USF3-202ENST00000478658 C8AP07357 584 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms