RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LNX1Q8TBB1 728 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 DEPDC1BQ8WUY9 529 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SORCS1Q8WY21 1168 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 PIGBQ92521 554 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 FIG4Q92562 907 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SPDL1Q96EA4 605 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SIPA1Q96FS4 1042 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SEPHS2Q99611 448 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 EGFL8Q99944 293 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 BTBD10Q9BSF8 475 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 EVA1AQ9H8M9 152 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 EBF2Q9HAK2 575 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 NPAP1Q9NZP6 1156 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLC24A2Q9UI40 661 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 NUDCQ9Y266 331 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF646O15015 1829 aaPredicted RBP3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLX4Q8IY92 1834 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 ARAP2Q8WZ64 1704 aa3.81□□□□□ -1.8
CDC42BPA-212ENST00000478573 RIC1Q4ADV7 1423 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 HEG1Q9ULI3 1381 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 FLT1P17948 1338 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 A0A087WV48 116 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 A0A0G2JPF8 293 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 CTAGE9A4FU28 777 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 C5orf60A6NFR6 353 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 HNRNPCL3B7ZW38 293 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 PI4K2BG5E9Z4 385 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 BMP10O95393 424 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 GCNT3O95395 438 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 RAB40ALP0C0E4 278 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 CTAGE8P0CG41 777 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 HNRNPCL4P0DMR1 293 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 ITGA2P17301 1181 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLC9A3P48764 834 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 NPY4RP50391 375 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 ISL1P61371 349 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 PPARDQ03181 441 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 RBPJQ06330 500 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 ITPK1Q13572 414 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 RBBP5Q15291 538 aaKnown RBP3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 PRR27Q6MZM9 219 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 TUBA1AQ71U36 451 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 TRMT1LQ7Z2T5 733 aaKnown RBP3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 MFN1Q8IWA4 741 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 CTAGE4Q8IX94 777 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 CEP57L1Q8IYX8 460 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR8H3Q8N146 312 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 GBGT1Q8N5D6 347 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 RDM1Q8NG50 284 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 ROBO4Q8WZ75 1007 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 SECISBP2LQ93073 1101 aaKnown RBP3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 MTERF3Q96E29 417 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 MUS81Q96NY9 551 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 GBP5Q96PP8 586 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 TUBA1CQ9BQE3 449 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 LMF2Q9BU23 707 aaKnown RBP3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 DPP3Q9NY33 737 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 GTF3C4Q9UKN8 822 aa3.8□□□□□ -1.8
CDC42BPA-212ENST00000478573 ADCY9O60503 1353 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 IBTKQ9P2D0 1353 aaPredicted RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 LTBP1Q14766 1721 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 USP42Q9H9J4 1324 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ELOVL7A1L3X0 281 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 PRR32B1ATL7 298 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 HNRNPCL2B2RXH8 293 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 H0Y626 953 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 WDR46O15213 610 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 HTATSF1O43719 755 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 DIAPH2O60879 1101 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 PDE9AO76083 593 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 HMOX1P09601 288 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 CSF2RAP15509 400 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 EEF1B2P24534 225 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 PRKAR2BP31323 418 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 HSPA4P34932 840 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 AHRP35869 848 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 KRT2P35908 639 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ARCN1P48444 511 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 MMP15P51511 669 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 MLLT10P55197 1068 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 PHEXP78562 749 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ACSM1Q08AH1 577 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 PLA2G7Q13093 441 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 DMP1Q13316 513 aaPredicted RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 MTHFSDQ2M296 383 aaKnown RBP3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 KRT39Q6A163 491 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR7E24Q6IFN5 339 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 KLC3Q6P597 504 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 PET117Q6UWS5 81 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 RAD9BQ6WBX8 426 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 DET1Q7L5Y6 550 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 DGLUCYQ7Z3D6 616 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ADCK2Q7Z695 626 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 L3MBTL4Q8NA19 623 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 IQUBQ8NA54 791 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 SETD6Q8TBK2 473 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 LRRC8CQ8TDW0 803 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ERO1AQ96HE7 468 aa3.79□□□□□ -1.8
CDC42BPA-212ENST00000478573 ABHD8Q96I13 439 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms