RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 SLC2A11Q9BYW1 496 aa13□□□□□ -0.33
HDAC7-221ENST00000477203 OSGEPL1Q9H4B0 414 aa13□□□□□ -0.33
HDAC7-221ENST00000477203 C6orf203Q9P0P8 240 aaPredicted RBP13□□□□□ -0.33
HDAC7-221ENST00000477203 GULP1Q9UBP9 304 aa13□□□□□ -0.33
HDAC7-221ENST00000477203 VPS4AQ9UN37 437 aa13□□□□□ -0.33
HDAC7-221ENST00000477203 AP4B1Q9Y6B7 739 aa13□□□□□ -0.33
HDAC7-221ENST00000477203 PRSS51A0A1B0GVH4 220 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 BBIP1A8MTZ0 92 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 KAT7O95251 611 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 RB1P06400 928 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 EBLN1P0CF75 366 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 CATSPEREQ5SY80 951 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 CACHD1Q5VU97 1274 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 UTS2BQ765I0 119 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 PKP4Q99569 1192 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 HOPXQ9BPY8 73 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 BRINP2Q9C0B6 783 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 FZD3Q9NPG1 666 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 TIMMDC1Q9NPL8 285 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 THEGQ9P2T0 379 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 CCL27Q9Y4X3 112 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 PCDHA9Q9Y5H5 950 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 A0A1W2PP55 124 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 NUAK1O60285 661 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 C8GP07360 202 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 TMEM102Q8N9M5 508 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 NCLNQ969V3 563 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 DTD2Q96FN9 168 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 OR4K3Q96R72 315 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 CCM2Q9BSQ5 444 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 PAIP1Q9H074 479 aaKnown RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 HCN2Q9UL51 889 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 SCN2AQ99250 2005 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 ADAM23O75077 832 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 SERPINB7O75635 380 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 POP7O75817 140 aaKnown RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 PGRP06401 933 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 ZNF8P17098 575 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 OPRD1P41143 372 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 RUNX3Q13761 415 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 DOC2AQ14183 400 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 ELAVL3Q14576 367 aaKnown RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 DUSP6Q16828 381 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 PDCD4Q53EL6 469 aaKnown RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 OTUD3Q5T2D3 398 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 OR4F3Q6IEY1 312 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 ZFP1Q6P2D0 407 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 KIAA0907Q7Z7F0 614 aaPredicted RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 C10orf111Q8N326 155 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 DDHD1Q8NEL9 900 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 OR7A2PQ8NGA2 310 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 SLC13A3Q8WWT9 602 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 VPS50Q96JG6 964 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 RPF2Q9H7B2 306 aaKnown RBP12.99□□□□□ -0.33
HDAC7-221ENST00000477203 SFXN1Q9H9B4 322 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 NDUFA13Q9P0J0 144 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 FBXO10Q9UK96 956 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 CCDC88CQ9P219 2028 aa12.99□□□□□ -0.33
HDAC7-221ENST00000477203 RNF103-CHMP3A0A140T963 221 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 HOXC11O43248 304 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 EEDO75530 441 aaKnown RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 CPSF4O95639 269 aaKnown RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 SOD1P00441 154 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 MYCLP1P12525 358 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 P2RY2P41231 377 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 PHC1P78364 1004 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ZBTB49Q6ZSB9 765 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 MINDY1Q8N5J2 469 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ZNF740Q8NDX6 193 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 CXorf40AQ8TE69 158 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 CGREF1Q99674 301 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 GPRC5BQ9NZH0 403 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ZIM2Q9NZV7 527 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 DPP7Q9UHL4 492 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 UTS2RQ9UKP6 389 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 MAGED1Q9Y5V3 778 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 EDDM13A0A1B0GTR0 161 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 C7orf72A4D263 438 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ANKRD28O15084 1053 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 GSTA4O15217 222 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ABCB1P08183 1280 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 SRPRAP08240 638 aaKnown RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ERVK-21P61565 698 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 LAPTM5Q13571 262 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 FRG2Q64ET8 278 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 GLYATQ6IB77 296 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 C8orf82Q6P1X6 216 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 DLEU7Q6UYE1 221 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 FAM83HQ6ZRV2 1179 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-221ENST00000477203 ADGRG6Q86SQ4 1221 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 HEATR4Q86WZ0 1026 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 FAM20CQ8IXL6 584 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 TRIML2Q8N7C3 387 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 FAM86B1Q8N7N1 296 aa12.98□□□□□ -0.33
HDAC7-221ENST00000477203 FRG2BQ96QU4 278 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms