RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SYTL1Q8IYJ3 562 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 NLGN4XQ8N0W4 816 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 CARFQ8N187 725 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 NLGN4YQ8NFZ3 816 aaPredicted RBP11.94□□□□□ -0.5
APTX-220ENST00000476858 SMPDL3AQ92484 453 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 ALKBH8Q96BT7 664 aaKnown RBP11.94□□□□□ -0.5
APTX-220ENST00000476858 TCTN2Q96GX1 697 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 OR4K3Q96R72 315 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 DPH7Q9BTV6 452 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 ANKZF1Q9H8Y5 726 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 PARVBQ9HBI1 364 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 GPAMQ9HCL2 828 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 PCMTD2Q9NV79 361 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.94□□□□□ -0.5
APTX-220ENST00000476858 DHCR7Q9UBM7 475 aaKnown RBP11.94□□□□□ -0.5
APTX-220ENST00000476858 CROTQ9UKG9 612 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 PCDHB11Q9Y5F2 797 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 FER1L5A0AVI2 2057 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 ATMQ13315 3056 aa11.94□□□□□ -0.5
APTX-220ENST00000476858 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 OR2A25A4D2G3 310 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 FOXO6A8MYZ6 492 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 K7ENP7 123 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 HAT1O14929 419 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 NKX2-8O15522 239 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 CNOT3O75175 753 aaKnown RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 C8GP07360 202 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 CAPN1P07384 714 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 SLC35E2BP0CK96 405 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 CCDC166P0CW27 439 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 CD82P27701 267 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 MAP4P27816 1152 aaKnown RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 STX2P32856 288 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 RPA3P35244 121 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 RORAP35398 523 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 NAE1Q13564 534 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 SLMAPQ14BN4 828 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 UAP1Q16222 522 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 MANEAQ5SRI9 462 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 TMTC4Q5T4D3 741 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 MROH9Q5TGP6 573 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 ICE2Q659A1 982 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 ZNF385CQ66K41 422 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 ZNF425Q6IV72 752 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 INO80CQ6PI98 192 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 PAQR7Q86WK9 346 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 IL22RA1Q8N6P7 574 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 ZNF655Q8N720 491 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 GABPB2Q8TAK5 448 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 ESAMQ96AP7 390 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 PDLIM5Q96HC4 596 aaKnown RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 MACROD1Q9BQ69 325 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 ZPBPQ9BS86 351 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 RAB11FIP5Q9BXF6 653 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 FUT8Q9BYC5 575 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 CHST8Q9H2A9 424 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 SPNS1Q9H2V7 528 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 ACSS3Q9H6R3 686 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 IGSF5Q9NSI5 407 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 INTS7Q9NVH2 962 aaKnown RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 NSMCE4AQ9NXX6 385 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 EURLQ9NYK6 297 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 MTRF1LQ9UGC7 380 aaKnown RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.93□□□□□ -0.5
APTX-220ENST00000476858 ASB1Q9Y576 335 aa11.93□□□□□ -0.5
APTX-220ENST00000476858 V9GYY5 206 aaPredicted RBP11.93□□□□□ -0.5
APTX-220ENST00000476858 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 ESPNB1AK53 854 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 SLC16A5O15375 505 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 P2RX6O15547 441 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 OR2B3O76000 313 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 ALDOAP04075 364 aaKnown RBP11.92□□□□□ -0.5
APTX-220ENST00000476858 MSL3P1P0C860 447 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 CD1DP15813 335 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 GDF5P43026 501 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 ITGA1P56199 1179 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 VSX2P58304 361 aaPredicted RBP11.92□□□□□ -0.5
APTX-220ENST00000476858 POU4F1Q01851 419 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 MEF2AQ02078 507 aaPredicted RBP11.92□□□□□ -0.5
APTX-220ENST00000476858 VAC14Q08AM6 782 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 SP140Q13342 867 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 ARHGAP19Q14CB8 494 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 GRTP1Q5TC63 336 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 FAM219BQ5XKK7 198 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 FAM198BQ6UWH4 519 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 CCDC81Q6ZN84 652 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 METTL27Q8N6F8 245 aaPredicted RBP11.92□□□□□ -0.5
APTX-220ENST00000476858 MAGEC3Q8TD91 643 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 MCOLN3Q8TDD5 553 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 DCAKDQ8WVC6 231 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 KCTD4Q8WVF5 259 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 CDKL2Q92772 493 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 MED8Q96G25 268 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 CCDC138Q96M89 665 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 SGPP1Q9BX95 441 aa11.92□□□□□ -0.5
APTX-220ENST00000476858 ACTR5Q9H9F9 607 aaPredicted RBP11.92□□□□□ -0.5
APTX-220ENST00000476858 MRPS30Q9NP92 439 aaKnown RBP11.92□□□□□ -0.5
APTX-220ENST00000476858 LHX9Q9NQ69 397 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms