RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MAATS1Q7Z4T9 603 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 ZBED8Q8IZ13 594 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 GPATCH11Q8N954 259 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 BBOF1Q8ND07 529 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 SEC14L1Q92503 715 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 ABHD17AQ96GS6 310 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 OLFM1Q99784 485 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 SELENOSQ9BQE4 189 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 DPH7Q9BTV6 452 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 NDC1Q9BTX1 674 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 SYNPO2LQ9H987 977 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 ENAMQ9NRM1 1142 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 SLC22A11Q9NSA0 550 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 MOCS1Q9NZB8 636 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 TAC3Q9UHF0 121 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 PCSK5Q92824 1860 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 LOC105369274A0A096LPK9 316 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 LOC102723532A0A0G2JNH3 316 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 A0A0J9YVX5 310 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 C9J4A7 227 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 CNOT3O75175 753 aaKnown RBP20.27■□□□□ 0.84
LIME1-204ENST00000476183 KLF7O75840 302 aaPredicted RBP20.27■□□□□ 0.84
LIME1-204ENST00000476183 TSPAN12O95859 305 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 FDXRP22570 491 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 IMPA1P29218 277 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 PMS2P54278 862 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 FOXL2P58012 376 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 VSX2P58304 361 aaPredicted RBP20.27■□□□□ 0.84
LIME1-204ENST00000476183 DCDP81605 110 aaKnown RBP20.27■□□□□ 0.84
LIME1-204ENST00000476183 SLC9A5Q14940 896 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 MLIPQ5VWP3 458 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 CPZQ66K79 652 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 FBXO42Q6P3S6 717 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 RNF44Q7L0R7 432 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 ZNF572Q7Z3I7 529 aaPredicted RBP20.27■□□□□ 0.84
LIME1-204ENST00000476183 TMEM151BQ8IW70 566 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 OR4N4Q8N0Y3 316 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 LINGO1Q96FE5 620 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 TRIM55Q9BYV6 548 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 MRPS30Q9NP92 439 aaKnown RBP20.27■□□□□ 0.84
LIME1-204ENST00000476183 TXLNGQ9NUQ3 528 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 PDE10AQ9Y233 779 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 VWA7Q9Y334 891 aa20.27■□□□□ 0.84
LIME1-204ENST00000476183 FITM1A5D6W6 292 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 ZNF839A8K0R7 811 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 NDC80O14777 642 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 DNAJB5O75953 348 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 MED26O95402 600 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 RGS4P49798 205 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 PRDX1Q06830 199 aaKnown RBP20.26■□□□□ 0.83
LIME1-204ENST00000476183 MGAT5Q09328 741 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 CALCOCO2Q13137 446 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 NKAIN1Q4KMZ8 207 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 TCTE1Q5JU00 501 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 ICE2Q659A1 982 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 LRRC8EQ6NSJ5 796 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 MBOAT1Q6ZNC8 495 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 TTLL10Q6ZVT0 673 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 PAQR7Q86WK9 346 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 DTWD1Q8N5C7 304 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 THAP4Q8WY91 577 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 PLCD4Q9BRC7 762 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 ZNF71Q9NQZ8 489 aaPredicted RBP20.26■□□□□ 0.83
LIME1-204ENST00000476183 CUTCQ9NTM9 273 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 ABCF3Q9NUQ8 709 aa20.26■□□□□ 0.83
LIME1-204ENST00000476183 CORO1CQ9ULV4 474 aaPredicted RBP20.26■□□□□ 0.83
LIME1-204ENST00000476183 MDC1Q14676 2089 aaKnown RBP20.26■□□□□ 0.83
LIME1-204ENST00000476183 SRPX2O60687 465 aaPredicted RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 PIAS1O75925 651 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 C8GP07360 202 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 ALAS2P22557 587 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 ARSFP54793 590 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 CHAF1BQ13112 559 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 GRM7Q14831 915 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 TRADDQ15628 312 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 PHKG1Q16816 387 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 WASHC2DQ5SRD0 308 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 ZNF425Q6IV72 752 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 MRPL14Q6P1L8 145 aaKnown RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 CAPN12Q6ZSI9 719 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 APLFQ8IW19 511 aaPredicted RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 C9orf43Q8TAL5 461 aaPredicted RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 C16orf45Q96MC5 204 aaPredicted RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 DHRS4Q9BTZ2 278 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 SAYSD1Q9NPB0 183 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 SMYD2Q9NRG4 433 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 ZFATQ9P243 1243 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 STOX2Q9P2F5 926 aaPredicted RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 IFT80Q9P2H3 777 aaPredicted RBP20.25■□□□□ 0.83
LIME1-204ENST00000476183 TLK1Q9UKI8 766 aa20.25■□□□□ 0.83
LIME1-204ENST00000476183 A0A1B0GX78 115 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 ARGFXA6NJG6 315 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 K7EM74 188 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 DSCR3O14972 297 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 RFPL1O75677 317 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 PDAP1Q13442 181 aaKnown RBP20.24■□□□□ 0.83
LIME1-204ENST00000476183 FAM45BPQ6NSW5 357 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 TMEM207Q6UWW9 146 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 STRA8Q7Z7C7 330 aa20.24■□□□□ 0.83
LIME1-204ENST00000476183 ZC3HC1Q86WB0 502 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms