RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 MED13LQ71F56 2210 aa13.36□□□□□ -0.27
CCDC78-209ENST00000474647 FITM1A5D6W6 292 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 FFAR3O14843 346 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 GPR42O15529 346 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 GPC4O75487 556 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 COX6A1P12074 109 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 TNFSF10P50591 281 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 TDGF1P3P51864 188 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 PRAMEP78395 509 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 ZXDCQ2QGD7 858 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-209ENST00000474647 LDB1Q86U70 411 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-209ENST00000474647 LRRC8AQ8IWT6 810 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 RAB42Q8N4Z0 105 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 NR4A3Q92570 626 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 CABS1Q96KC9 395 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 ZNF285Q96NJ3 590 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 TAAR6Q96RI8 345 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 TRIM56Q9BRZ2 755 aaKnown RBP13.35□□□□□ -0.27
CCDC78-209ENST00000474647 ANAPC5Q9UJX4 755 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 RUVBL2Q9Y230 463 aaKnown RBP13.35□□□□□ -0.27
CCDC78-209ENST00000474647 DUSP10Q9Y6W6 482 aa13.35□□□□□ -0.27
CCDC78-209ENST00000474647 LOC105369274A0A096LPK9 316 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 TRAV17A0A0B4J275 112 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 LOC102723532A0A0G2JNH3 316 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 TARM1B6A8C7 271 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CCL21O00585 134 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 PCDH17O14917 1159 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 SRPX2O60687 465 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-209ENST00000474647 UNC5CO95185 931 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CELA2AP08217 269 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 PRR35P0CG20 571 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CXCR2P25025 360 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 PSMA3P25788 255 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 PPARGP37231 505 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-209ENST00000474647 INAQ16352 499 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 MUM1Q2TAK8 710 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CCSMST1Q4G0I0 132 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 TSTD2Q5T7W7 516 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
CCDC78-209ENST00000474647 PRMT9Q6P2P2 845 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 TMEM207Q6UWW9 146 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 ZNF534Q76KX8 674 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 NDUFAF7Q7L592 441 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 GDF7Q7Z4P5 450 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CCDC170Q8IYT3 715 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 OR4N4Q8N0Y3 316 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 OR2L3Q8NG85 312 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 ITLN2Q8WWU7 325 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-209ENST00000474647 RELTQ969Z4 430 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 ZUFSPQ96AP4 578 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 RAD51AP1Q96B01 352 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CCDC120Q96HB5 630 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 ZNF778Q96MU6 729 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 CARD6Q9BX69 1037 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 TTC7AQ9ULT0 858 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-209ENST00000474647 R3HDM2Q9Y2K5 976 aaKnown RBP13.34□□□□□ -0.27
CCDC78-209ENST00000474647 NFS1Q9Y697 457 aa13.34□□□□□ -0.27
CCDC78-209ENST00000474647 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 E7EVH7 732 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 WFS1O76024 890 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 FKBP9O95302 570 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
CCDC78-209ENST00000474647 AOAHP28039 575 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 SOX11P35716 441 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 CCZ1BP86790 482 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 CCZ1P86791 482 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-209ENST00000474647 ART3Q13508 389 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 ATG9BQ674R7 924 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-209ENST00000474647 RNF44Q7L0R7 432 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 MRGPRGQ86SM5 289 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 C10orf90Q96M02 699 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 ACAT2Q9BWD1 397 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 CATSPERZQ9NTU4 200 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 TRPC4Q9UBN4 977 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 SEC14L3Q9UDX4 400 aa13.33□□□□□ -0.28
CCDC78-209ENST00000474647 PACSIN2Q9UNF0 486 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-209ENST00000474647 MRPS2Q9Y399 296 aaKnown RBP13.33□□□□□ -0.28
CCDC78-209ENST00000474647 IGHV1-45A0A0A0MS14 117 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 GRID2IPA4D2P6 1211 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 IDSB3KWA1 339 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 NRDCO43847 1150 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 SLCO2B1O94956 709 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 RASAL1O95294 804 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 C1orf105O95561 183 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 HEXBP07686 556 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 COX6B1P14854 86 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 FDXRP22570 491 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 ADRA1DP25100 572 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 HTR1EP28566 365 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 GRIA1P42261 906 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 EMP2P54851 167 aa13.32□□□□□ -0.28
CCDC78-209ENST00000474647 TSTA3Q13630 321 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 AARS2Q5JTZ9 985 aaKnown RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 HIBCHQ6NVY1 386 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-209ENST00000474647 RAD9BQ6WBX8 426 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms