RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FHL5Q5TD97 284 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 CCDC137Q6PK04 289 aaKnown RBP19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 COX15Q7KZN9 410 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 IQCKQ8N0W5 287 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 CALML6Q8TD86 181 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 GRK7Q8WTQ7 553 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 SERPINB12Q96P63 405 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 ZFYVE21Q9BQ24 234 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 ZNF552Q9H707 407 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 SEMA3GQ9NS98 782 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 COMMD10Q9Y6G5 202 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 HEATR5BQ9P2D3 2071 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 USP9YO00507 2555 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 A0A0J9YVX5 310 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 OR2A25A4D2G3 310 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 ARHGEF33A8MVX0 844 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 PGRMC1O00264 195 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 CCNDBP1O95273 360 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 UQCRFS1P47985 274 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 CLCN7P51798 805 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 FOXL2P58012 376 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 FASTKQ14296 549 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 MUM1Q2TAK8 710 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 IRAK1BP1Q5VVH5 260 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 ZADH2Q8N4Q0 377 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 KCNJ9Q92806 393 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 MS4A14Q96JA4 679 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 SPSB2Q99619 263 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 DPH7Q9BTV6 452 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 ZNF304Q9HCX3 659 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 MRPS30Q9NP92 439 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 LUZP4Q9P127 313 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 MAP10Q9P2G4 905 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 ZC3H7BQ9UGR2 993 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 FBXL4Q9UKA2 621 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 DOCK10Q96BY6 2186 aa19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 SPTBN1Q01082 2364 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-206ENST00000474421 GOLGA6L10A0A0M3HER8 536 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 KRT87PA6NCN2 255 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 EIF2S1P05198 315 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 GP1BBP13224 206 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 ENO3P13929 434 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 ITGA3P26006 1051 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 OR1D4P47884 311 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 CARSP49589 748 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 EMP3P54852 163 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 OCA2Q04671 838 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 LONRF1Q17RB8 773 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 KCTD19Q17RG1 926 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 PRAMEF13Q5VWM6 474 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 FRMPD2BQ6IN97 320 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 FBXO15Q8NCQ5 510 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 PLCD4Q9BRC7 762 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 ACAT2Q9BWD1 397 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 ILKAPQ9H0C8 392 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 GALPQ9UBC7 116 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 CTSFQ9UBX1 484 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 CDC14AQ9UNH5 594 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 NEU2Q9Y3R4 380 aa19.45■□□□□ 0.7
PDLIM4-206ENST00000474421 SPTAN1Q13813 2472 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 ZCWPW2A0A1B0GU75 182 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 VSTM2BA6NLU5 285 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 GOLGA8MH3BSY2 632 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 SOCS6O14544 535 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 AGFG2O95081 481 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 FNTAP49354 379 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 PNLIPRP1P54315 467 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 PRDX1Q06830 199 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 RBBP7Q16576 425 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 PLEKHN1Q494U1 663 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 FBXO42Q6P3S6 717 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 REXO1L1PQ8IX06 675 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 METTL27Q8N6F8 245 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 INPP5DQ92835 1189 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 PSMG3-AS1Q96PY0 264 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 PKP4Q99569 1192 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 TRIM56Q9BRZ2 755 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 SOX17Q9H6I2 414 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 LRRC4CQ9HCJ2 640 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 SLC6A20Q9NP91 592 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 C20orf96Q9NUD7 363 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 ZNF282Q9UDV7 671 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 HS3ST3B1Q9Y662 390 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 MAD1L1Q9Y6D9 718 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 MAU2Q9Y6X3 613 aa19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 MDC1Q14676 2089 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-206ENST00000474421 LOC105369274A0A096LPK9 316 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 LOC102723532A0A0G2JNH3 316 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 H0YGG7 62 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 PRPF4O43172 522 aaKnown RBP eCLIP19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 KIF5CO60282 957 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 MPC1LP0DKB6 136 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 MAGEA3P43357 314 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 ARF3P61204 181 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 ABATP80404 500 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 RELAQ04206 551 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 CTBP1Q13363 440 aa19.43■□□□□ 0.7
PDLIM4-206ENST00000474421 TSTA3Q13630 321 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms