RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 DLL3Q9NYJ7 618 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 XRCC1P18887 633 aaPredicted RBP19.69■□□□□ 0.74
CDHR3-210ENST00000474330 PKLRP30613 574 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 ID4P47928 161 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 IRF8Q02556 426 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 E2F2Q14209 437 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 ELOCQ15369 112 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 LMNTD1Q8N9Z9 388 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 SMPDL3AQ92484 453 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 PIGKQ92643 395 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 C3orf30Q96M34 536 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 DYRK1BQ9Y463 629 aa19.69■□□□□ 0.74
CDHR3-210ENST00000474330 KCNE1BA0A087WTH5 132 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 KIR2DS5A0A0G2JLQ3 304 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 PRAMEF33A0A0G2JMD5 474 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 A0A0G2JNG1 304 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 PATE3B3GLJ2 98 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 E7EQ34 232 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 KIR2DS3K7RE56 304 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 SLC2A4P14672 509 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 HOXD12P35452 270 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 CASP2P42575 452 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 HNRNPKP61978 463 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDHR3-210ENST00000474330 KIR2DS5Q14953 304 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 TCHHL1Q5QJ38 904 aaPredicted RBP19.68■□□□□ 0.74
CDHR3-210ENST00000474330 PRAMEF14Q5SWL7 426 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 PRAMEF13Q5VWM6 474 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 LARP4Q71RC2 724 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDHR3-210ENST00000474330 MYLK4Q86YV6 388 aaPredicted RBP19.68■□□□□ 0.74
CDHR3-210ENST00000474330 DDIASQ8IXT1 998 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 LINC01555Q8NAE3 123 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 OR2L8Q8NGY9 312 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 ZFPM2Q8WW38 1151 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 NEIL2Q969S2 332 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 ERP27Q96DN0 273 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 NRTNQ99748 197 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 HAUS8Q9BT25 410 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 NMUR2Q9GZQ4 415 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 PCBD2Q9H0N5 130 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 ERVMER34-1Q9H9K5 563 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 SPASTQ9UBP0 616 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 ZFP69BQ9UJL9 534 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 TRIM33Q9UPN9 1127 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 BTRCQ9Y297 605 aa19.68■□□□□ 0.74
CDHR3-210ENST00000474330 TRBV23OR9-2A0A075B6M9 112 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 FCHO1O14526 889 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 JUPP14923 745 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 TSTA3Q13630 321 aaPredicted RBP19.67■□□□□ 0.74
CDHR3-210ENST00000474330 DOC2AQ14183 400 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 TBCCQ15814 346 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 XKR7Q5GH72 579 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 XKR6Q5GH73 641 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 SPDYAQ5MJ70 313 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 THEMIS2Q5TEJ8 643 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 SLCO4C1Q6ZQN7 724 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 RABEPKQ7Z6M1 372 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 CLNKQ7Z7G1 428 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 NAGSQ8N159 534 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 SDR16C5Q8N3Y7 309 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 C2orf73Q8N5S3 287 aaPredicted RBP19.67■□□□□ 0.74
CDHR3-210ENST00000474330 GBP7Q8N8V2 638 aaPredicted RBP19.67■□□□□ 0.74
CDHR3-210ENST00000474330 WDR34Q96EX3 536 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 POT1Q9NUX5 634 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 ICKQ9UPZ9 632 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 ADAMTS9Q9P2N4 1935 aa19.67■□□□□ 0.74
CDHR3-210ENST00000474330 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.66■□□□□ 0.74
CDHR3-210ENST00000474330 A0A1W2PPV9 198 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 E9PBE3 544 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 KLHL41O60662 606 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 VPS4BO75351 444 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 KRT6AP02538 564 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 KRT6BP04259 564 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 LINC00032P0C843 101 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 HNF4AP41235 474 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 KRT6CP48668 564 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 HTR6P50406 440 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 CPSF6Q16630 551 aaKnown RBP eCLIP19.66■□□□□ 0.74
CDHR3-210ENST00000474330 NXNQ6DKJ4 435 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 GRHL2Q6ISB3 625 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 IL27RAQ6UWB1 636 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 GKN2Q86XP6 184 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 SFRP1Q8N474 314 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 FAM46DQ8NEK8 389 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 USP7Q93009 1102 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 XKR8Q9H6D3 395 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 SLC40A1Q9NP59 571 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 SAR1AQ9NR31 198 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 SNX6Q9UNH7 406 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 PTGDR2Q9Y5Y4 395 aa19.66■□□□□ 0.74
CDHR3-210ENST00000474330 A0A1B0GVT2 93 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ATP6AP2A0A1C7CYW4 349 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 FFAR3O14843 346 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 GPR42O15529 346 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ULK1O75385 1050 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 ATP6AP2O75787 350 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 CD22P20273 847 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 SHMT2P34897 504 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 UBE2IP63279 158 aaKnown RBP19.65■□□□□ 0.74
CDHR3-210ENST00000474330 FAM91A1Q658Y4 838 aa19.65■□□□□ 0.74
CDHR3-210ENST00000474330 YTHDF3Q7Z739 585 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms