RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SLC14A1Q13336 389 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 MSANTD2Q6P1R3 559 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 MILR1Q7Z6M3 343 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 SNAPC3Q92966 411 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 KCNC2Q96PR1 638 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 INPP5KQ9BT40 448 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 SMURF1Q9HCE7 757 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 CSNK1G1Q9HCP0 422 aa18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 UBA2Q9UBT2 640 aaPredicted RBP18.11■□□□□ 0.49
ECHDC1-214ENST00000474289 RGS5O15539 181 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ZNF780AO75290 641 aaPredicted RBP18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ERN1O75460 977 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 FGF1P05230 155 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 PGFP49763 221 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 FCHO2Q0JRZ9 810 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ABHD18Q0P651 414 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 GTF2H2Q13888 395 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 CDONQ4KMG0 1287 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 LRIF1Q5T3J3 769 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 MLIPQ5VWP3 458 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 GTF2H2CQ6P1K8 395 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ANKRD46Q86W74 232 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 UMODL1-AS1Q8N2C9 162 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 COL21A1Q96P44 957 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 RAD9AQ99638 391 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 SEMA3CQ99985 751 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 DYRK4Q9NR20 520 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ASAH2Q9NR71 780 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 FARSBQ9NSD9 589 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 MIOSQ9NXC5 875 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 TRMT6Q9UJA5 497 aaKnown RBP18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 A0A075B6Q4 140 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 PDHXO00330 501 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 FFAR3O14843 346 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 WNT9AO14904 365 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 TEX28O15482 410 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 GPR42O15529 346 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 SEMG1P04279 462 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 LHX1P48742 406 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 IL2P60568 153 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 TAB1Q15750 504 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ZNF79Q15937 498 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 GNASQ5JWF2 1037 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 ZSWIM9Q86XI8 627 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 CACTIN-AS1Q8N1I8 211 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 CD200R1Q8TD46 325 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 GPR151Q8TDV0 419 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 MYLPFQ96A32 169 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 SPATA17Q96L03 361 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 GABARAPL3Q9BY60 117 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 REEP1Q9H902 201 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 RAD18Q9NS91 495 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 TAS2R16Q9NYV7 291 aa18.1■□□□□ 0.49
ECHDC1-214ENST00000474289 A0A1W2PQ09 198 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PTGESO14684 152 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 RGS14O43566 566 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 AOC2O75106 756 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 VPS26AO75436 327 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 MYCP01106 439 aaPredicted RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 HLA-DPA1P20036 260 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 M6PRP20645 277 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PTPN6P29350 595 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 CDKN2CP42773 168 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 OLR1P78380 273 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ARHGEF6Q15052 776 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 INO80DQ53TQ3 878 aaPredicted RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 TEX26Q8N6G2 289 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ASB15Q8WXK1 588 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 RMDN1Q96DB5 314 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ZFP42Q96MM3 310 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PRRG3Q9BZD7 231 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 IPPKQ9H8X2 491 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ATP13A2Q9NQ11 1180 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 DOCK4Q8N1I0 1966 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 WASH4PA8MWX3 477 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 OR1I1O60431 355 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 FKBP9O95302 570 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 DARSP14868 501 aaKnown RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PRIM2P49643 509 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 HYAL2Q12891 473 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 MAD2L1Q13257 205 aaPredicted RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 EFR3AQ14156 821 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PCBP2Q15366 365 aaKnown RBP eCLIP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 C10orf62Q5T681 223 aaPredicted RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PIK3R6Q5UE93 754 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 CACHD1Q5VU97 1274 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 TMEM132CQ8N3T6 1108 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 STX19Q8N4C7 294 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ZFAND1Q8TCF1 268 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 KCNH6Q9H252 994 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ZNF408Q9H9D4 720 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 C3orf14Q9HBI5 128 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 KCNN3Q9UGI6 736 aa18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 TSR3Q9UJK0 312 aaKnown RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 ZNF490Q9ULM2 529 aaPredicted RBP18.09■□□□□ 0.49
ECHDC1-214ENST00000474289 PLXNB2O15031 1838 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 TTC3P53804 2025 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 A0A0B4J293 547 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 A0A1W2PQ72 361 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 GFRA2O00451 464 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms