RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ABATP80404 500 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 DLG1Q12959 904 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 ACAP2Q15057 778 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 OR4D1Q15615 310 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 ZIC1Q15915 447 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 DEFB110Q30KQ9 67 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 ZC3H12BQ5HYM0 836 aaKnown RBP11.94□□□□□ -0.5
DDX56-209ENST00000473924 ADCK2Q7Z695 626 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 LRRC56Q8IYG6 542 aaPredicted RBP11.94□□□□□ -0.5
DDX56-209ENST00000473924 CENPLQ8N0S6 344 aaPredicted RBP11.94□□□□□ -0.5
DDX56-209ENST00000473924 ZNF248Q8NDW4 579 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 OR8K5Q8NH50 307 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 PYCR2Q96C36 320 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 ZNF501Q96CX3 271 aaPredicted RBP11.94□□□□□ -0.5
DDX56-209ENST00000473924 NAF1Q96HR8 494 aaKnown RBP11.94□□□□□ -0.5
DDX56-209ENST00000473924 CABS1Q96KC9 395 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 DCBLD2Q96PD2 775 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 DPH7Q9BTV6 452 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 ULBP3Q9BZM4 244 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 SERTAD3Q9UJW9 196 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 ANKRD12Q6UB98 2062 aa11.94□□□□□ -0.5
DDX56-209ENST00000473924 TLDC2A0PJX2 215 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SYCE1LA8MT33 242 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SUPT3HB4E1H0 165 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 STMND1H3BQB6 276 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 RRP8O43159 456 aaKnown RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 TLX3O43711 291 aaPredicted RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 KERAO60938 352 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SUPT3HO75486 399 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 CAPNS1P04632 268 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 MSL3P1P0C860 447 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 COL6A2P12110 1019 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 KRT15P19012 456 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 MAGEA12P43365 314 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 ITGA1P56199 1179 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 YBX1P67809 324 aaKnown RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 TSNAXIP1Q2TAA8 658 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 PTCHD3Q3KNS1 767 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDX56-209ENST00000473924 FCRL6Q6DN72 434 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 LCTLQ6UWM7 567 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 ISCA2Q86U28 154 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 C17orf64Q86WR6 236 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 ZFAND4Q86XD8 727 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 PROSER1Q86XN7 944 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 TMEM126BQ8IUX1 230 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 GPR135Q8IZ08 494 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 TCAIMQ8N3R3 496 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 KDF1Q8NAX2 398 aaPredicted RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 OR56A3Q8NH54 315 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SNIP1Q8TAD8 396 aaKnown RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 EPS8L3Q8TE67 593 aaKnown RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 KCNE4Q8WWG9 221 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 ISL2Q96A47 359 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 RHBDF1Q96CC6 855 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 RNF31Q96EP0 1072 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SCYL1Q96KG9 808 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 HAUS8Q9BT25 410 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SGPP1Q9BX95 441 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SLC7A5P2Q9GIP4 190 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 CHRNA10Q9GZZ6 450 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SLC6A20Q9NP91 592 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
DDX56-209ENST00000473924 PCMTD2Q9NV79 361 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 WWOXQ9NZC7 414 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 ANKMY1Q9P2S6 941 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 SNX7Q9UNH6 387 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 PLCL2Q9UPR0 1127 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 PCM1Q15154 2024 aa11.93□□□□□ -0.5
DDX56-209ENST00000473924 CCDC189A1A4V9 331 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 E7EQ34 232 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 H7BY64 318 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 CDH16O75309 829 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 ERLIN1O75477 346 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 RFPL1O75677 317 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 SCRG1O75711 98 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 OR2B3O76000 313 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 STK17BO94768 372 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 KIAA0754O94854 1291 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 WDR47O94967 919 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 MT-ND3P03897 115 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 NUDT17P0C025 328 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 LIPCP11150 499 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 HRH2P25021 359 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 CDKL4Q5MAI5 379 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 SULT1C3Q6IMI6 304 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 PWWP2BQ6NUJ5 590 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 THOC6Q86W42 341 aaKnown RBP11.92□□□□□ -0.5
DDX56-209ENST00000473924 TDRPQ86YL5 185 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 MCATQ8IVS2 390 aaKnown RBP11.92□□□□□ -0.5
DDX56-209ENST00000473924 PLD6Q8N2A8 252 aaKnown RBP11.92□□□□□ -0.5
DDX56-209ENST00000473924 DNAJC22Q8N4W6 341 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 MREGQ8N565 214 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 OR1L3Q8NH93 324 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 OR2W6PQ8NHA6 318 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 RHEBL1Q8TAI7 183 aa11.92□□□□□ -0.5
DDX56-209ENST00000473924 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms