RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ABCF3Q9NUQ8 709 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 PCDHGA6Q9Y5G7 932 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 OR2A25A4D2G3 310 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF839A8K0R7 811 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 ERVH48-1M5A8F1 160 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 ATXN7O15265 892 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 ZSCAN9O15535 394 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 KATNA1O75449 491 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 WISP3O95389 354 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 GP5P40197 560 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 GCGRP47871 477 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 RPS18P62269 152 aaKnown RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 TBPL1P62380 186 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 CDC20Q12834 499 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 ZXDCQ2QGD7 858 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 ICE2Q659A1 982 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 FRMPD2BQ6IN97 320 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 FAM198BQ6UWH4 519 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 SBSNQ6UWP8 590 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 RNF44Q7L0R7 432 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 CTAGE3PQ8IX95 158 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 PPM1NQ8N819 430 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 MCOLN3Q8TDD5 553 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 IFT81Q8WYA0 676 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 EXTL1Q92935 676 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 PDLIM5Q96HC4 596 aaKnown RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 GPR22Q99680 433 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 EFHD1Q9BUP0 239 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 MRPS30Q9NP92 439 aaKnown RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 STARD5Q9NSY2 213 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 NINJ2Q9NZG7 142 aa18.16■□□□□ 0.5
PTCD3-210ENST00000473829 DHCR7Q9UBM7 475 aaKnown RBP18.16■□□□□ 0.5
PTCD3-210ENST00000473829 MDC1Q14676 2089 aaKnown RBP18.15■□□□□ 0.5
PTCD3-210ENST00000473829 C21orf140B9A014 251 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 CDC7O00311 574 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 CAPN1P07384 714 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 FURINP09958 794 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 STX2P32856 288 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 PRDX1Q06830 199 aaKnown RBP18.15■□□□□ 0.5
PTCD3-210ENST00000473829 PPP1R3AQ16821 1122 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 LINC00303Q3SY05 128 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 GLE1Q53GS7 698 aaKnown RBP18.15■□□□□ 0.5
PTCD3-210ENST00000473829 ZC3H12BQ5HYM0 836 aaKnown RBP18.15■□□□□ 0.5
PTCD3-210ENST00000473829 C1orf189Q5VU69 101 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF425Q6IV72 752 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 AGTRAPQ6RW13 159 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 PAQR7Q86WK9 346 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 CEP112Q8N8E3 955 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 CCDC138Q96M89 665 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF285Q96NJ3 590 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 PLCD4Q9BRC7 762 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 SLC7A5P2Q9GIP4 190 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 ATG10Q9H0Y0 220 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 ACTL8Q9H568 366 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 CUEDC1Q9NWM3 386 aaPredicted RBP18.15■□□□□ 0.5
PTCD3-210ENST00000473829 IRAK4Q9NWZ3 460 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 SH2B3Q9UQQ2 575 aa18.15■□□□□ 0.5
PTCD3-210ENST00000473829 ATRXP46100 2492 aa18.14■□□□□ 0.5
PTCD3-210ENST00000473829 SEC16AO15027 2179 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 LOC105369274A0A096LPK9 316 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 LOC102723532A0A0G2JNH3 316 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 A0A0J9YVX5 310 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 NPEPPSL1A6NEC2 478 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 PHGDHO43175 533 aaKnown RBP18.14■□□□□ 0.49
PTCD3-210ENST00000473829 KLK3P07288 261 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-210ENST00000473829 NFKB2Q00653 900 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 POU4F1Q01851 419 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 TBR1Q16650 682 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 FAM69BQ5VUD6 431 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 RHBDD2Q6NTF9 364 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 C16orf46Q6P387 395 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 TLDC1Q6P9B6 456 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 OR4N4Q8N0Y3 316 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 GBP5Q96PP8 586 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 SELENOSQ9BQE4 189 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 UNKQ9C0B0 810 aaKnown RBP18.14■□□□□ 0.49
PTCD3-210ENST00000473829 POPDC3Q9HBV1 291 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 CCDC177Q9NQR7 707 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-210ENST00000473829 TXNDC16Q9P2K2 825 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 KCND3Q9UK17 655 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 AP1M2Q9Y6Q5 423 aa18.14■□□□□ 0.49
PTCD3-210ENST00000473829 CREG1O75629 220 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 MED26O95402 600 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 HBQ1P09105 142 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 GMPRP36959 345 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 VSX2P58304 361 aaPredicted RBP18.13■□□□□ 0.49
PTCD3-210ENST00000473829 USP10Q14694 798 aaKnown RBP18.13■□□□□ 0.49
PTCD3-210ENST00000473829 THEMIS2Q5TEJ8 643 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 PRAMEF13Q5VWM6 474 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 FBXO42Q6P3S6 717 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 RELL1Q8IUW5 271 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 DTWD1Q8N5C7 304 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 NKAPQ8N5F7 415 aaKnown RBP18.13■□□□□ 0.49
PTCD3-210ENST00000473829 ENDOVQ8N8Q3 282 aaKnown RBP18.13■□□□□ 0.49
PTCD3-210ENST00000473829 MED8Q96G25 268 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 FMO2Q99518 471 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 FAM129AQ9BZQ8 928 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 CDC42EP4Q9H3Q1 356 aaKnown RBP18.13■□□□□ 0.49
PTCD3-210ENST00000473829 GPAMQ9HCL2 828 aa18.13■□□□□ 0.49
PTCD3-210ENST00000473829 ENAMQ9NRM1 1142 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms