RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PRODH2Q9UF12 536 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 MAN2B2Q9Y2E5 1009 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SQORQ9Y6N5 450 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ABCC6O95255 1503 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 FAM237AA0A1B0GTK4 181 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PLD2O14939 933 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DHX15O43143 795 aaKnown RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 CRISP3P54108 245 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 TSPAN5P62079 268 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CUZD1Q86UP6 607 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DCUN1D3Q8IWE4 304 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ARRDC3Q96B67 414 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CRB3Q9BUF7 120 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GAREM1Q9H706 876 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PCDHGA2Q9Y5H1 932 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GJE1A6NN92 205 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 H3BQF6 201 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 PRAMEF12O95522 483 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 CYBAP13498 195 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 TSHRP16473 764 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 GRIA3P42263 894 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 TAS2R40P59535 323 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LRRC26Q2I0M4 334 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 OR52E4Q8NGH9 312 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 CHRAC1Q9NRG0 131 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 GDE1Q9NZC3 331 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 PRORSD1PA6NEY8 169 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 HAS3O00219 553 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 CHP2O43745 196 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 SSNA1O43805 119 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 MED26O95402 600 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 HRGP04196 525 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 IFNW1P05000 195 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LPLP06858 475 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 PROS1P07225 676 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 IL32P24001 234 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 FAUP35544 74 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 MAP3K8P41279 467 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 IRF5Q13568 498 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 HNRNPDQ14103 355 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 DGCR6Q14129 220 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 ZIK1Q3SY52 487 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.36□□□□□ -1.07
CD47-204ENST00000471694 HAVCR1Q96D42 359 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 DNAJA3Q96EY1 480 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 NARS2Q96I59 477 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 SLC17A9Q9BYT1 436 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 FARSBQ9NSD9 589 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 PPM1HQ9ULR3 514 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 TRAF6Q9Y4K3 522 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 PCDHGA8Q9Y5G5 932 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 UBR1Q8IWV7 1749 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 BCL9LQ86UU0 1499 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 ANXA2P2A6NMY6 339 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 CHST10O43529 356 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 PSIP1O75475 530 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 GLSO94925 669 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 ARSFP54793 590 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 TIMM50Q3ZCQ8 353 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 KHDC1LQ5JSQ8 128 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LRIF1Q5T3J3 769 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 IL23RQ5VWK5 629 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 DHRSXQ8N5I4 330 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 SORCS1Q8WY21 1168 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 CPT1BQ92523 772 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 NKD2Q969F2 451 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 TOP1MTQ969P6 601 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 RHOJQ9H4E5 214 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LYARQ9NX58 379 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 A0A0U1RQJ8 604 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 PDE5AO76074 875 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 HCKP08631 526 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 VHLP40337 213 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 POLR2JP52435 117 aaKnown RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 ZNF648Q5T619 568 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 ERICH5Q6P6B1 374 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 OR9K2Q8NGE7 335 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 NAT6Q93015 286 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 GPR62Q9BZJ7 368 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 FZD8Q9H461 694 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 HHATLQ9HCP6 504 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 POLE3Q9NRF9 147 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 OR1A2Q9Y585 309 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 DPPA5A6NC42 116 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 MEN1O00255 615 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 GCH1P30793 250 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 STK19P49842 368 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 IFI35P80217 286 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 SIM1P81133 766 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 OGDHQ02218 1023 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 TMEM115Q12893 351 aaPredicted RBP8.36□□□□□ -1.07
CD47-204ENST00000471694 NSDHLQ15738 373 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 DCAF12L1Q5VU92 463 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 KIAA0319Q5VV43 1072 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LANCL3Q6ZV70 420 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 ASPGQ86U10 573 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 C10orf107Q8IVU9 208 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 CSNK1A1LQ8N752 337 aa8.36□□□□□ -1.07
CD47-204ENST00000471694 LGR4Q9BXB1 951 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms