RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 GTF2H2CQ6P1K8 395 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 LRRC70Q7Z2Q7 622 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SLCO6A1Q86UG4 719 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 NUDCD3Q8IVD9 361 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SLC22A9Q8IVM8 553 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SLITRK4Q8IW52 837 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TCAIMQ8N3R3 496 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 RNF175Q8N4F7 328 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TEX9Q8N6V9 391 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 ZNF781Q8N8C0 355 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 ANKRD53Q8N9V6 530 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 RAB3IL1Q8TBN0 382 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TRPC4APQ8TEL6 797 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SETD7Q8WTS6 366 aaKnown RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SKA2Q8WVK7 121 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 LCN9Q8WX39 176 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 SMPDL3AQ92484 453 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 CXorf40BQ96DE9 158 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 MAGEB18Q96M61 343 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 ZNF285Q96NJ3 590 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 ZNF382Q96SR6 550 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 DUSP23Q9BVJ7 150 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 NOL11Q9H8H0 719 aaKnown RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 MANSC1Q9H8J5 431 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 PNPOQ9NVS9 261 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 GEMIN8Q9NWZ8 242 aaKnown RBP9.52□□□□□ -0.89
SF3A1-207ENST00000471342 RAB23Q9ULC3 237 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 TMCO1Q9UM00 188 aa9.52□□□□□ -0.89
SF3A1-207ENST00000471342 FLRT2O43155 660 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 EDF1O60869 148 aaKnown RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 SMIM24O75264 130 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 UBXN7O94888 489 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 WDR47O94967 919 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 OR4F21O95013 312 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ETHE1O95571 254 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 GFAPP14136 432 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CD1EP15812 388 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ST6GAL1P15907 406 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ALOX15P16050 662 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CKMT2P17540 419 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 HSD17B2P37059 387 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 GRK6P43250 576 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CAPZBP47756 277 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 SLC1A6P48664 564 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 SEC24CP53992 1094 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CLDN6P56747 220 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CDC16Q13042 620 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 KIR2DS3Q14952 304 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 NR0B2Q15466 257 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 SLC5A12Q1EHB4 618 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 GGTA1PQ4G0N0 100 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 KANK2Q63ZY3 851 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ICE2Q659A1 982 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ATG9BQ674R7 924 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 NXPE4Q6UWF7 544 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 Q6ZSR9 355 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 EFL1Q7Z2Z2 1120 aaKnown RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ARHGAP22Q7Z5H3 698 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 VN1R4Q7Z5H5 301 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 TAX1BP1Q86VP1 789 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 NAXDQ8IW45 347 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 LRRC34Q8IZ02 419 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 DNAJC22Q8N4W6 341 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 OR4F6Q8NGB9 312 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 OR2T11Q8NH01 316 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 FAM76AQ8TAV0 307 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CREB3L4Q8TEY5 395 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 KLHL6Q8WZ60 621 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 USP7Q93009 1102 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 TM4SF19Q96DZ7 209 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 CNDP1Q96KN2 507 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 C3orf30Q96M34 536 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 C7orf26Q96N11 449 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 FOPNLQ96NB1 174 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 FCRL4Q96PJ5 515 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 TRAPPC9Q96Q05 1148 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 OR2A5Q96R48 311 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 MIPEPQ99797 713 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ZNF717Q9BY31 904 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 SHCBP1LQ9BZQ2 653 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 IPPKQ9H8X2 491 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 SEMA4BQ9NPR2 832 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 TMEM9BQ9NQ34 198 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 LHX9Q9NQ69 397 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 FARSBQ9NSD9 589 aaKnown RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 DNAJC11Q9NVH1 559 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 HRASLS2Q9NWW9 162 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 GPRC5BQ9NZH0 403 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 TAC3Q9UHF0 121 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ADAM21Q9UKJ8 722 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 ATXN7L1Q9ULK2 861 aaPredicted RBP9.51□□□□□ -0.89
SF3A1-207ENST00000471342 TSC22D4Q9Y3Q8 395 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 DNAJC15Q9Y5T4 150 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 PTGDR2Q9Y5Y4 395 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 RP1P56715 2156 aa9.51□□□□□ -0.89
SF3A1-207ENST00000471342 IGHV5-51A0A0C4DH38 117 aa9.5□□□□□ -0.89
SF3A1-207ENST00000471342 SERTM1A2A2V5 107 aa9.5□□□□□ -0.89
SF3A1-207ENST00000471342 PIPSLA2A3N6 862 aa9.5□□□□□ -0.89
SF3A1-207ENST00000471342 TMEM114B3SHH9 223 aa9.5□□□□□ -0.89
SF3A1-207ENST00000471342 NPIPB8E9PQR5 432 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms