RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 RGS21Q2M5E4 152 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 VMACQ2NL98 169 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 SYT6Q5T7P8 510 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 NIPAL1Q6NVV3 410 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 ERICH5Q6P6B1 374 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 UBE2R2Q712K3 238 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 ANKRD46Q86W74 232 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 ZZZ3Q8IYH5 903 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 CPXM2Q8N436 756 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 OR2AP1Q8NGE2 309 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 CSGALNACT1Q8TDX6 532 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 NELL1Q92832 810 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 MAGEB10Q96LZ2 347 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 MCCC1Q96RQ3 725 aaPredicted RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 IL21Q9HBE4 155 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 NECTIN3Q9NQS3 549 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 NDRG4Q9ULP0 352 aaKnown RBP13.27□□□□□ -0.29
BRCA1-209ENST00000470026 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.29
BRCA1-209ENST00000470026 CLDN25C9JDP6 229 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 PTGES3LE9PB15 166 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 SLC22A1O15245 554 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 JRKO75564 520 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 KCNK5O95279 499 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 ALDH1A1P00352 501 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 FTH1P02794 183 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 PRPS1L1P21108 318 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 DNAJA1P31689 397 aaKnown RBP13.26□□□□□ -0.29
BRCA1-209ENST00000470026 KIR3DL1P43629 444 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 NEK2P51955 445 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 PTSQ03393 145 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 LMAN2Q12907 356 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 ZNF846Q147U1 533 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 PTCHD3Q3KNS1 767 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 ATP13A5Q4VNC0 1218 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 OR4F3Q6IEY1 312 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 PIWIL3Q7Z3Z3 882 aaKnown RBP13.26□□□□□ -0.29
BRCA1-209ENST00000470026 MCOLN3Q8TDD5 553 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 EGLN2Q96KS0 407 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 SIGLEC11Q96RL6 698 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 ZNF334Q9HCZ1 680 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-209ENST00000470026 EXD2Q9NVH0 621 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 TPRKBQ9Y3C4 175 aa13.26□□□□□ -0.29
BRCA1-209ENST00000470026 EVPLLA8MZ36 301 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 HOXA9P31269 272 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 KDELR2P33947 212 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PSMD7P51665 324 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 IL5RAQ01344 420 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 SRSF11Q05519 484 aaKnown RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 UGT8Q16880 541 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 IQCCQ4KMZ1 466 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 LRRC66Q68CR7 880 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 NOXRED1Q6NXP6 359 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 CBLL1Q75N03 491 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PTOV1Q86YD1 416 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ARL14EPQ8N8R7 260 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 FIBINQ8TAL6 211 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 LMLNQ96KR4 655 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ZNF641Q96N77 438 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 FRG2BQ96QU4 278 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ZNF300Q96RE9 604 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PITX2Q99697 317 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 NMRK2Q9NPI5 230 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 KIAA1522Q9P206 1035 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ERVK-18Q9QC07 812 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 RPS6KA6Q9UK32 745 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 TMPRSS11EQ9UL52 423 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 CLEC4EQ9ULY5 219 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ERVK-11Q9UQG0 969 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 CPQQ9Y646 472 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 BOLA2-SMG1P6H3BVE0 249 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 CLIC1O00299 241 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 UGDHO60701 494 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 SOD2P04179 222 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 OR56A5P0C7T3 313 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 JUPP14923 745 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 LHCGRP22888 699 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 MASP1P48740 699 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 AP1S2P56377 157 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 RAB33AQ14088 237 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 OXA1LQ15070 435 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PGS1Q32NB8 556 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PLEKHG6Q3KR16 790 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 SLC44A4Q53GD3 710 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 PLEKHS1Q5SXH7 462 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ZDHHC20Q5W0Z9 365 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 NEK10Q6ZWH5 1172 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 ZBTB46Q86UZ6 589 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 TSPYL5Q86VY4 417 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 TTC16Q8NEE8 873 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 OR8J2Q8NGG1 315 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 OR10Q1Q8NGQ4 319 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 RORBQ92753 470 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 C11orf24Q96F05 449 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 MROQ9BYG7 248 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms