RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ENGP17813 658 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 DRD4P21917 467 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CXCR5P32302 372 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CTNNA1P35221 906 aaKnown RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CSNK1DP48730 415 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CCT8P50990 548 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 THOP1P52888 689 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ADPRHP54922 357 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 EEFSECP57772 596 aaKnown RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ARF5P84085 180 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CCDC173Q0VFZ6 552 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CNTN1Q12860 1018 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PEX6Q13608 980 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PAFAH1B3Q15102 231 aaKnown RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PDCD2Q16342 344 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CA9Q16790 459 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ST3GAL2Q16842 350 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 AARS2Q5JTZ9 985 aaKnown RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ARMC12Q5T9G4 340 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 TLDC1Q6P9B6 456 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 LEKR1Q6ZMV7 388 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PTCHD4Q6ZW05 846 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 TRIM69Q86WT6 500 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 CDKL3Q8IVW4 592 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ZCCHC9Q8N567 271 aaKnown RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 NKAPQ8N5F7 415 aaKnown RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 DEFB119Q8N690 84 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 SIRT6Q8N6T7 355 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 SUMF1Q8NBK3 374 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 OR2A12Q8NGT7 310 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 GPR150Q8NGU9 434 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 HDAC11Q96DB2 347 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 TRIM44Q96DX7 344 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ZNF419Q96HQ0 510 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-208ENST00000469585 LMLNQ96KR4 655 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 RNF157Q96PX1 679 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PSMB7Q99436 277 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 VAT1Q99536 393 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 NUDT22Q9BRQ3 303 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 EDEM2Q9BV94 578 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 SLC39A8Q9C0K1 460 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 NEUROG2Q9H2A3 272 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 LRRC19Q9H756 370 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 PPCSQ9HAB8 311 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 NT5MQ9NPB1 228 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 LZTFL1Q9NQ48 299 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 FSCN3Q9NQT6 498 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 GDF3Q9NR23 364 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 C2orf42Q9NWW7 574 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 ENTPD2Q9Y5L3 495 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 OR51B4Q9Y5P0 310 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 DMRT1Q9Y5R6 373 aa6.19□□□□□ -1.42
PTCD3-208ENST00000469585 MUC6Q6W4X9 2439 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 MYO18AQ92614 2054 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 C16orf96A6NNT2 1141 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 J3KR12 359 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 J3KTA2 159 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 APOC4-APOC2K7ER74 178 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 K7ERQ8 282 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 SMAD6O43541 496 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 PLRG1O43660 514 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 MFSD11O43934 449 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ZMPSTE24O75844 475 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 TM7SF2O76062 418 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 APOC2P02655 101 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 SLPIP03973 132 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 PYGLP06737 847 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ANXA6P08133 673 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 NPSP0C0P6 89 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 TMEM225BP0DP42 221 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 CREB1P16220 341 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 BCKDHBP21953 392 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 HNRNPA2B1P22626 353 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 KELP23276 732 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 CD38P28907 300 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 MAT2AP31153 395 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ACSL1P33121 698 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 LMAN1P49257 510 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 BLKP51451 505 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 SUMO2P61956 95 aaKnown RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 PSG6Q00889 435 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 GALNT2Q10471 571 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 FOXO1Q12778 655 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 RPS6KA1Q15418 735 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 RAB6CQ53S08 254 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 NCBP2-AS2Q69YL0 99 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 NAPEPLDQ6IQ20 393 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 GRHL2Q6ISB3 625 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 LIN54Q6MZP7 749 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ASCL5Q7RTU5 278 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 GSTA5Q7RTV2 222 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 PTAR1Q7Z6K3 402 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-208ENST00000469585 HORMAD1Q86X24 394 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 GATAD2AQ86YP4 633 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 SIMC1Q8NDZ2 872 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ABHD11Q8NFV4 315 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 OR6K2Q8NGY2 324 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 RMDN1Q96DB5 314 aa6.18□□□□□ -1.42
PTCD3-208ENST00000469585 ALG14Q96F25 216 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms