RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 INTS7Q9NVH2 962 aaKnown RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 TMEM181Q9P2C4 612 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 ADGRE2Q9UHX3 823 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 RUVBL1Q9Y265 456 aaKnown RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 AP3M1Q9Y2T2 418 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 L3MBTL1Q9Y468 752 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 OR1A2Q9Y585 309 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 HEBP2Q9Y5Z4 205 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 CEP192Q8TEP8 1941 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 E7ENX8 843 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ANKRD28O15084 1053 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 BCAS2O75934 225 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 KCNH1O95259 989 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 C1GALT1C1LP0DN25 315 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 HSD17B1P14061 328 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ANPEPP15144 967 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 CXCR2P25025 360 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ASMTP46597 345 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ZFP36L2P47974 494 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 DGKEP52429 567 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SLC7A2P52569 658 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 EEFSECP57772 596 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 PPP2CBP62714 309 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 PPP2CAP67775 309 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ACSM2AQ08AH3 577 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 TSTA3Q13630 321 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 CCNIQ14094 377 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 MAP7Q14244 749 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 TRIM25Q14258 630 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 NFATC4Q14934 902 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 PUS10Q3MIT2 529 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 USP39Q53GS9 565 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ACSM2BQ68CK6 577 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 PTCRAQ6ISU1 281 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 LAYNQ6UX15 382 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 ZNF852Q6ZMS4 543 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SLCO4C1Q6ZQN7 724 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 LRRC74BQ6ZQY2 392 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 FAM124AQ86V42 546 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 RETREG3Q86VR2 466 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 KRT78Q8N1N4 520 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 OR5AR1Q8NGP9 310 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 WDR20Q8TBZ3 569 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SLC13A3Q8WWT9 602 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SMPDL3AQ92484 453 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 KLK6Q92876 244 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 RSRC1Q96IZ7 334 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 LRGUKQ96M69 825 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 WDR92Q96MX6 357 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 OR2M4Q96R27 311 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 OR4K3Q96R72 315 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 GPATCH1Q9BRR8 931 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 PITHD1Q9GZP4 211 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SLC6A17Q9H1V8 727 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 OSGEPL1Q9H4B0 414 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 CLMPQ9H6B4 373 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 MVB12BQ9H7P6 319 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 RMND5AQ9H871 391 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SLC52A3Q9NQ40 469 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 SPATA6Q9NWH7 488 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 VPS29Q9UBQ0 182 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 NKX1-2Q9UD57 310 aaPredicted RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 MOSPD1Q9UJG1 213 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 MRPS17Q9Y2R5 130 aaKnown RBP9.04□□□□□ -0.96
SMC1A-205ENST00000469129 C15orf41Q9Y2V0 281 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 TSC22D4Q9Y3Q8 395 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 PRKAB1Q9Y478 270 aa9.04□□□□□ -0.96
SMC1A-205ENST00000469129 F5P12259 2224 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PRSS38A1L453 326 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PIPSLA2A3N6 862 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 KRT87PA6NCN2 255 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PDZK1P1A8MUH7 402 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 FXYD1O00168 92 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 FOXE1O00358 373 aaPredicted RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TNFRSF10CO14798 259 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 NARSO43776 548 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CCNDBP1O95273 360 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 APBB3O95704 486 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 SEMA4FO95754 770 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 IGLV3-19P01714 112 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CEACAM5P06731 702 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 ASGR2P07307 311 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PCNAP12004 261 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 BCKDHAP12694 445 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 IL9P15248 144 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CD1EP15812 388 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 AMD1P17707 334 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 GABRG2P18507 467 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CD22P20273 847 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 NDUFS1P28331 727 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 OXTRP30559 389 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 MAT2AP31153 395 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 DPP6P42658 865 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 PTDSS1P48651 473 aaKnown RBP9.03□□□□□ -0.96
SMC1A-205ENST00000469129 TPMTP51580 245 aa9.03□□□□□ -0.96
SMC1A-205ENST00000469129 CLCNKAP51800 687 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms