RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 MC1RQ01726 317 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 GPR19Q15760 415 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 LINC00303Q3SY05 128 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 CGB2Q6NT52 195 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 NEPROQ6NW34 567 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 OTOAQ7RTW8 1153 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 CCDC91Q7Z6B0 441 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 CILP2Q8IUL8 1156 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 DCUN1D3Q8IWE4 304 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 UNC5BQ8IZJ1 945 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 SIGLEC10Q96LC7 697 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 CHRNA10Q9GZZ6 450 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 INTS10Q9NVR2 710 aaKnown RBP13.97□□□□□ -0.17
COL27A1-203ENST00000468565 ZNF180Q9UJW8 692 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 PADI1Q9ULC6 663 aa13.97□□□□□ -0.17
COL27A1-203ENST00000468565 ZCWPW2A0A1B0GU75 182 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 TERTO14746 1132 aaKnown RBP13.96□□□□□ -0.17
COL27A1-203ENST00000468565 EDF1O60869 148 aaKnown RBP13.96□□□□□ -0.17
COL27A1-203ENST00000468565 C1QL1O75973 258 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 UBOX5O94941 541 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 UGT2B7P16662 529 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 PKLRP30613 574 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 RAB28P51157 221 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 CYP4F2P78329 520 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 TBR1Q16650 682 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 LMNTD2Q8IXW0 634 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 AGGF1Q8N302 714 aaeCLIP13.96□□□□□ -0.17
COL27A1-203ENST00000468565 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 GSDMBQ8TAX9 411 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 TCP10LQ8TDR4 215 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 EXTL1Q92935 676 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 MED8Q96G25 268 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 APOPT1Q96IL0 206 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 CATSPER2Q96P56 530 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 OR2A14Q96R47 310 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 TRIM56Q9BRZ2 755 aaKnown RBP13.96□□□□□ -0.17
COL27A1-203ENST00000468565 MENTQ9BUN1 341 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 LHX9Q9NQ69 397 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 IL17BQ9UHF5 180 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 CROTQ9UKG9 612 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 PLAGL1Q9UM63 463 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 PCDHB3Q9Y5E6 796 aa13.96□□□□□ -0.17
COL27A1-203ENST00000468565 CPNE3O75131 537 aaKnown RBP13.96□□□□□ -0.18
COL27A1-203ENST00000468565 SCRG1O75711 98 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 PIAS1O75925 651 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 PRB1P04280 392 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 FMO4P31512 558 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 DLSTP36957 453 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 C19orf57Q0VDD7 668 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 ABRQ12979 859 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 LY6DQ14210 128 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 KIR2DS3Q14952 304 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 SLC5A12Q1EHB4 618 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 GALNTL6Q49A17 601 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 TMEM126BQ8IUX1 230 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 CCDC63Q8NA47 563 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 FLVCR1-AS1Q8TAF5 88 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 STARD8Q92502 1023 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 ZNF75CPQ92670 426 aaPredicted RBP13.96□□□□□ -0.18
COL27A1-203ENST00000468565 LRFN5Q96NI6 719 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 EBNA1BP2Q99848 306 aaKnown RBP13.96□□□□□ -0.18
COL27A1-203ENST00000468565 VPS11Q9H270 941 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 KCND3Q9UK17 655 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 GRID1Q9ULK0 1009 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 MAD1L1Q9Y6D9 718 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 FER1L5A0AVI2 2057 aa13.96□□□□□ -0.18
COL27A1-203ENST00000468565 KALRNO60229 2985 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 GOLGA8RI6L899 631 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 NIPSNAP2O75323 286 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 SNRPAP09012 282 aaKnown RBP13.95□□□□□ -0.18
COL27A1-203ENST00000468565 PKMP14618 531 aaKnown RBP13.95□□□□□ -0.18
COL27A1-203ENST00000468565 ALDH3A1P30838 453 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 SLC18A2Q05940 514 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 THOC5Q13769 683 aaKnown RBP13.95□□□□□ -0.18
COL27A1-203ENST00000468565 GRB7Q14451 532 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 GBX1Q14549 363 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 C19orf47Q8N9M1 422 aaKnown RBP13.95□□□□□ -0.18
COL27A1-203ENST00000468565 CFAP61Q8NHU2 1237 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 CALML6Q8TD86 181 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 RNF31Q96EP0 1072 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 TCTN2Q96GX1 697 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 ARHGAP9Q9BRR9 750 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 RAB11FIP5Q9BXF6 653 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 SPHK1Q9NYA1 384 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 CRYL1Q9Y2S2 319 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 PCDHGA6Q9Y5G7 932 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 USH1CQ9Y6N9 552 aa13.95□□□□□ -0.18
COL27A1-203ENST00000468565 PIEZO2Q9H5I5 2752 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 A0A0J9YY10 115 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 C21orf140B9A014 251 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 NKX2-8O15522 239 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 FAM155BO75949 473 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 S1PR4O95977 384 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 RECKO95980 971 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 NTRK1P04629 796 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 PVRP15151 417 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 F8A1P23610 371 aa13.94□□□□□ -0.18
COL27A1-203ENST00000468565 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms