RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TTMPQ5BVD1 217 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PRAMEF14Q5SWL7 426 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 RBM20Q5T481 1227 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 HECTD2Q5U5R9 776 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 LYPLAL1Q5VWZ2 237 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 ZDHHC20Q5W0Z9 365 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PTRHD1Q6GMV3 140 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 NAPRTQ6XQN6 538 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 KDM7AQ6ZMT4 941 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 RAPH1Q70E73 1250 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CYS1Q717R9 158 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 MARK2Q7KZI7 788 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 TAOK1Q7L7X3 1001 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 TECPR1Q7Z6L1 1165 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CROCCP2Q86T23 111 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 TRIM74Q86UV6 250 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 KBTBD6Q86V97 674 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 HORMAD1Q86X24 394 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 SRRM1Q8IYB3 904 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PIANPQ8IYJ0 282 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 NRSN1Q8IZ57 195 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 KRT222Q8N1A0 295 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 C4orf33Q8N1A6 199 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PELI3Q8N2H9 469 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 SPATA6LQ8N4H0 392 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 DCLK2Q8N568 766 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 TRAM1L1Q8N609 369 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 ACVR1CQ8NER5 493 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 DCAKDQ8WVC6 231 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CLDN23Q96B33 292 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 DTD2Q96FN9 168 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 COQ10AQ96MF6 247 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 RBBP8Q99708 897 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CPNE1Q99829 537 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PAIP2Q9BPZ3 127 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 SELENOSQ9BQE4 189 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 UNKQ9C0B0 810 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 VPS11Q9H270 941 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CCDC68Q9H2F9 335 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 EPHX3Q9H6B9 360 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 C6orf106Q9H6K1 298 aaPredicted RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 VIPAS39Q9H9C1 493 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CAB39LQ9H9S4 337 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 SGK2Q9HBY8 427 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CD248Q9HCU0 757 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 NSMCE4AQ9NXX6 385 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PSMC3IPQ9P2W1 217 aaPredicted RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 RIMKLBQ9ULI2 386 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 SCML1Q9UN30 329 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 CFAP20Q9Y6A4 193 aaKnown RBP4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 PRSS21Q9Y6M0 314 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 COL4A2P08572 1712 aa4.01□□□□□ -1.77
TMEM39A-204ENST00000468545 REV3LO60673 3130 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 IGHV1OR15-9A0A0B4J2B8 117 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RGSL1A5PLK6 1076 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CCDC154A6NI56 674 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 OR2AG2A6NM03 316 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 B5MCH6 92 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 E5RI56 91 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 H3BQF6 201 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 H7C0S8 307 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PSMD11O00231 422 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 GAPDHSO14556 408 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 FPGTO14772 594 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TPP1O14773 563 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RAD51BO15315 384 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 POLR3GO15318 223 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 PHGDHO43175 533 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 HOXA3O43365 443 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 AP1G1O43747 822 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 SGTAO43765 313 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CDH16O75309 829 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 NIPSNAP2O75323 286 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF217O75362 1048 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TCEA3O75764 348 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ITGA2BP08514 1039 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 OR56A5P0C7T3 313 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RALBP11234 206 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PKMP14618 531 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 CREB1P16220 341 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF7P17097 686 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 AOC1P19801 751 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 OGNP20774 298 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 ACRV1P26436 265 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 OAS2P29728 719 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 PBLDP30039 288 aaPredicted RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 ATP5DP30049 168 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 AKT2P31751 481 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 PTGER3P43115 390 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 RPS9P46781 194 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 LEPRP48357 1165 aaKnown RBP4□□□□□ -1.77
TMEM39A-204ENST00000468545 POLD2P49005 469 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TTPAP49638 278 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 CCR3P51677 355 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TAS2R39P59534 338 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 IRX4P78413 519 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 HHEXQ03014 270 aa4□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM115Q12893 351 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms