RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 WASHC2DQ5SRD0 308 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 C16orf47Q6ZP98 133 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 PAQR7Q86WK9 346 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 TBC1D21Q8IYX1 336 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 CIARTQ8N365 385 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 KCTD6Q8NC69 237 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 FAM71BQ8TC56 605 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 TRIM11Q96F44 468 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 ZNF285Q96NJ3 590 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 SCN2AQ99250 2005 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 COPS8Q99627 209 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 OLFM1Q99784 485 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 THAP2Q9H0W7 228 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 GLOD4Q9HC38 313 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 STOX2Q9P2F5 926 aaPredicted RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 ZC3H7BQ9UGR2 993 aaKnown RBP9.69□□□□□ -0.86
HDAC3-203ENST00000467533 FKBPLQ9UIM3 349 aa9.69□□□□□ -0.86
HDAC3-203ENST00000467533 CHD3Q12873 2000 aaKnown RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 IGHV3-20A0A0C4DH32 117 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 ARHGEF9O43307 516 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 NME2P1O60361 137 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 SLC25A12O75746 678 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 NEURL1O76050 574 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 EIF2S1P05198 315 aaKnown RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 TPBGLP0DKB5 382 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 C8orf89P0DMQ9 161 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 TFEBP19484 476 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 NME2P22392 152 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 PKLRP30613 574 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 ZFP36L2P47974 494 aaKnown RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 WNT3AP56704 352 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 HADHQ16836 314 aaKnown RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 MUM1Q2TAK8 710 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 ZNF658BQ4V348 819 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 FLYWCH1Q4VC44 716 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 FRMPD2BQ6IN97 320 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 FIGLAQ6QHK4 219 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 TMEM205Q6UW68 189 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 VWA5B2Q8N398 1253 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 C2orf73Q8N5S3 287 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 PQLC3Q8N755 202 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 OR5K2Q8NHB8 316 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 HEXDCQ8WVB3 486 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 METTL21AQ8WXB1 218 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 SLC22A18Q96BI1 424 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 ULK4Q96C45 1275 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 CABS1Q96KC9 395 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 FAM96AQ9H5X1 160 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 LUC7LQ9NQ29 371 aaKnown RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 BEX4Q9NWD9 120 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-203ENST00000467533 FAM153AQ9UHL3 310 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 CBLCQ9ULV8 474 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 HEY1Q9Y5J3 304 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 ARL5AQ9Y689 179 aa9.68□□□□□ -0.86
HDAC3-203ENST00000467533 LOC285095A0A1B0GVY8 99 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 HAX1O00165 279 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 MAN1A2O60476 641 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 SRPX2O60687 465 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-203ENST00000467533 AP2A1O95782 977 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 ANXA5P08758 320 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 MYBL1P10243 752 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 UQCRC1P31930 480 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 PEX19P40855 299 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 RFC3P40938 356 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 BRD3Q15059 726 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 KRT31Q15323 416 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 SYTL3Q4VX76 610 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 MFSD4BQ5TF39 518 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 PLAG1Q6DJT9 500 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 H3F3CQ6NXT2 135 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 ARHGAP11AQ6P4F7 1023 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 WDR53Q7Z5U6 358 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-203ENST00000467533 TMTC1Q8IUR5 882 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 P3H2Q8IVL5 708 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 NIPA2Q8N8Q9 360 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 POGLUT1Q8NBL1 392 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 OR4K2Q8NGD2 314 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 C10orf90Q96M02 699 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 SYT11Q9BT88 431 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 SARGQ9BW04 601 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 MKKSQ9NPJ1 570 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-203ENST00000467533 ENAMQ9NRM1 1142 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 TRPS1Q9UHF7 1281 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 IP6K2Q9UHH9 426 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 ANAPC7Q9UJX3 599 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 CDC14AQ9UNH5 594 aa9.67□□□□□ -0.86
HDAC3-203ENST00000467533 A0A0J9YVX5 310 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 LIN7AO14910 233 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 PPP1R12AO14974 1030 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 WIPF1O43516 503 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 HS6ST1O60243 411 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 CTSVO60911 334 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 S1PR4O95977 384 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 ITGALP20701 1170 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 CDK11BP21127 795 aaKnown RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 PDK2Q15119 407 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 SF1Q15637 639 aaKnown RBP9.66□□□□□ -0.86
HDAC3-203ENST00000467533 SLC1A5Q15758 541 aa9.66□□□□□ -0.86
HDAC3-203ENST00000467533 SLC25A35Q3KQZ1 300 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms