RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 NAA25Q14CX7 972 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 TECRLQ5HYJ1 363 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 BEND6Q5SZJ8 279 aaPredicted RBP13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 ICE2Q659A1 982 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 FCRL6Q6DN72 434 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 SULT1C3Q6IMI6 304 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 CYB5D1Q6P9G0 228 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 LCTLQ6UWM7 567 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 IQCKQ8N0W5 287 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 TCAIMQ8N3R3 496 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 HNRNPLLQ8WVV9 542 aaKnown RBP13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 USP7Q93009 1102 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 ZUFSPQ96AP4 578 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 PYCR2Q96C36 320 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 CHRNA10Q9GZZ6 450 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 SLC6A20Q9NP91 592 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 NUDT4Q9NZJ9 180 aa13.91□□□□□ -0.18
DNMT3A-208ENST00000466601 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 UBXN8O00124 270 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 POLR1CO15160 346 aaPredicted RBP13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 TAPBPO15533 448 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 NPPBP16860 134 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 TUBB3Q13509 450 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 IL11RAQ14626 422 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 GPR19Q15760 415 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 C18orf21Q32NC0 220 aaPredicted RBP13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 DCAF12Q5T6F0 453 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 TMEM164Q5U3C3 297 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 CDHR3Q6ZTQ4 885 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 LCA5Q86VQ0 697 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 KLHDC8AQ8IYD2 350 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 PDPRQ8NCN5 879 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 OR4K3Q96R72 315 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 CTRCQ99895 268 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 HAUS8Q9BT25 410 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 DDA1Q9BW61 102 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 B3GNT4Q9C0J1 378 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 APMAPQ9HDC9 416 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 ASCL3Q9NQ33 180 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 FGF21Q9NSA1 209 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 WWOXQ9NZC7 414 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 ANKMY1Q9P2S6 941 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 PTBP2Q9UKA9 531 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 RARRES3Q9UL19 164 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 PCDHGA3Q9Y5H0 932 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 KLK4Q9Y5K2 254 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 PCM1Q15154 2024 aa13.9□□□□□ -0.18
DNMT3A-208ENST00000466601 IGKV1-8A0A0C4DH67 115 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 CDRT15L2A8MXV6 281 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 C1QTNF9BB2RNN3 333 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 C9orf172C9J069 976 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 MAP2K7O14733 419 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 NVLO15381 856 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 GSTA1P08263 222 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 MSL3P1P0C860 447 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 C1QTNF9P0C862 333 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 FGF5P12034 268 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 MTHFD2P13995 350 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 GGT5P36269 586 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 GDF5P43026 501 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 SLC6A12P48065 614 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 GABRA4P48169 554 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 KRT71Q3SY84 523 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 CEACAM20Q6UY09 585 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 SH2D5Q6ZV89 423 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 THOC6Q86W42 341 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 BPHLQ86WA6 291 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 C17orf64Q86WR6 236 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 PPP1R3BQ86XI6 285 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 DNAJC22Q8N4W6 341 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 MDM1Q8TC05 714 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 N4BP2L2Q92802 583 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 PMEPA1Q969W9 287 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 ZNF501Q96CX3 271 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 ZIM3Q96PE6 472 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 MRPL57Q9BQC6 102 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 PLCD4Q9BRC7 762 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 ZPBPQ9BS86 351 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 TMEM79Q9BSE2 394 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 ASPSCR1Q9BZE9 553 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 CCDC86Q9H6F5 360 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 CNOT10Q9H9A5 744 aaKnown RBP13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 FANCEQ9HB96 536 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 THSD1Q9NS62 852 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 TMEM216Q9P0N5 145 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 XPR1Q9UBH6 696 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 DCDC2Q9UHG0 476 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 SNX7Q9UNH6 387 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 SLC22A14Q9Y267 594 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 PCDHGA7Q9Y5G6 932 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 B3GALT1Q9Y5Z6 326 aa13.89□□□□□ -0.19
DNMT3A-208ENST00000466601 OR2A25A4D2G3 310 aa13.88□□□□□ -0.19
DNMT3A-208ENST00000466601 TMEM150CB9EJG8 249 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms