RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CHI3L2Q15782 390 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 PDK4Q16654 411 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 SLC5A12Q1EHB4 618 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 ICE2Q659A1 982 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 ZNF425Q6IV72 752 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 GTF2H2CQ6P1K8 395 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 WDR74Q6RFH5 385 aaPredicted RBP10.74□□□□□ -0.69
VCP-204ENST00000466100 RAB44Q7Z6P3 723 aaPredicted RBP10.74□□□□□ -0.69
VCP-204ENST00000466100 FAM20CQ8IXL6 584 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 LSMEM2Q8N112 164 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 ARFGAP2Q8N6H7 521 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 TEX9Q8N6V9 391 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 FAM76AQ8TAV0 307 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 NEIL2Q969S2 332 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 SLC22A18Q96BI1 424 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 PPM1MQ96MI6 270 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 MIPEPQ99797 713 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 PAIP2Q9BPZ3 127 aaKnown RBP10.74□□□□□ -0.69
VCP-204ENST00000466100 NUDT22Q9BRQ3 303 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 HAUS8Q9BT25 410 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 ACAT2Q9BWD1 397 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 LRRN3Q9H3W5 708 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 SLC6A20Q9NP91 592 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 INTS9Q9NV88 658 aaKnown RBP10.74□□□□□ -0.69
VCP-204ENST00000466100 CUEDC1Q9NWM3 386 aaPredicted RBP10.74□□□□□ -0.69
VCP-204ENST00000466100 GPRC5BQ9NZH0 403 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 TMEM9Q9P0T7 183 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 SEMA5BQ9P283 1151 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 ZNF225Q9UK10 706 aa10.74□□□□□ -0.69
VCP-204ENST00000466100 KNTC1P50748 2209 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 SPTBN2O15020 2390 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 A0A0J9YY10 115 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 GSAPA4D1B5 854 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ISM1B1AKI9 464 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 E7EQ34 232 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 UBFD1O14562 309 aaKnown RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 SLC30A4O14863 429 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 KLF11O14901 512 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CAPN5O15484 640 aaPredicted RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 H2AFYO75367 372 aaKnown RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 SUPT7LO94864 414 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 SERPINE1P05121 402 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 RPLP0P05388 317 aaKnown RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 EPB42P16452 691 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 AMD1P17707 334 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CD22P20273 847 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CSRP1P21291 193 aaKnown RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 CASP2P42575 452 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 PIK3CGP48736 1102 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CDH13P55290 713 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 NAA20P61599 178 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CLCQ05315 142 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ASPHQ12797 758 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 LCP2Q13094 533 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ILKQ13418 452 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 TSTA3Q13630 321 aaPredicted RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 RCN2Q14257 317 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CLPPQ16740 277 aaPredicted RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 AMZ1Q400G9 498 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 KIAA1614Q5VZ46 1190 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ZNF574Q6ZN55 896 aaPredicted RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 SLCO4C1Q6ZQN7 724 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 TRIM73Q86UV7 250 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CCNYL1Q8N7R7 359 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 DEFB124Q8NES8 71 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ABHD11Q8NFV4 315 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 OR4K1Q8NGD4 311 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 OR52B6Q8NGF0 335 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 RAB3IL1Q8TBN0 382 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CKAP2Q8WWK9 683 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 SLC5A11Q8WWX8 675 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 WDR34Q96EX3 536 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ZNF382Q96SR6 550 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 CD180Q99467 661 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 TRMOQ9BU70 441 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 C20orf27Q9GZN8 174 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 DRC3Q9H069 523 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 SEMA4BQ9NPR2 832 aaPredicted RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 PDP2Q9P2J9 529 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 ATXN7L1Q9ULK2 861 aaPredicted RBP10.73□□□□□ -0.69
VCP-204ENST00000466100 PCDHGA1Q9Y5H4 931 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 AKAP13Q12802 2813 aa10.73□□□□□ -0.69
VCP-204ENST00000466100 KCNE1BA0A087WTH5 132 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 TLCD2A6NGC4 264 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 TMEM114B3SHH9 223 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 D6RAR5 112 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ZW10O43264 779 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 ITM2AO43736 263 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 KIF1CO43896 1103 aaKnown RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 NRP2O60462 931 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 SNNO75324 88 aaPredicted RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 WFS1O76024 890 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CCNDBP1O95273 360 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CPNE6O95741 557 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CHRNGP07510 517 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 THRAP10827 490 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 CDH1P12830 882 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
VCP-204ENST00000466100 TSPAN8P19075 237 aa10.72□□□□□ -0.69
VCP-204ENST00000466100 GNAZP19086 355 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms