RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PLEKHB1Q9UF11 243 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-215ENST00000465457 TAGLN3Q9UI15 199 aa13.45□□□□□ -0.26
HDAC6-215ENST00000465457 MED13Q9UHV7 2174 aa13.45□□□□□ -0.26
HDAC6-215ENST00000465457 CELSR2Q9HCU4 2923 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 NPEPPSL1A6NEC2 478 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 UBXN8O00124 270 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 FPGTO14772 594 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 SUPT7LO94864 414 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 SLC25A14O95258 325 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-215ENST00000465457 FTH1P02794 183 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 MTHFD2P13995 350 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 EZRP15311 586 aaKnown RBP13.44□□□□□ -0.26
HDAC6-215ENST00000465457 NQO1P15559 274 aaKnown RBP13.44□□□□□ -0.26
HDAC6-215ENST00000465457 UGT1A6P19224 532 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 UGT1A1P22309 533 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 UGT1A4P22310 534 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 UGT1A3P35503 534 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 MAPK9P45984 424 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 UQCRFS1P47985 274 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 LCP2Q13094 533 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 PFKFB4Q16877 469 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 ATP13A5Q4VNC0 1218 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 LRRC73Q5JTD7 316 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 GPRC6AQ5T6X5 926 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 ANKS6Q68DC2 871 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 CMTM5Q96DZ9 223 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 PTCD3Q96EY7 689 aaKnown RBP13.44□□□□□ -0.26
HDAC6-215ENST00000465457 CCDC106Q9BWC9 280 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 SPATA16Q9BXB7 569 aa13.44□□□□□ -0.26
HDAC6-215ENST00000465457 ZCCHC2Q9C0B9 1178 aaKnown RBP13.44□□□□□ -0.26
HDAC6-215ENST00000465457 SARS2Q9NP81 518 aaKnown RBP13.44□□□□□ -0.26
HDAC6-215ENST00000465457 A0A0U1RQS6 177 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 A8MX80 341 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 CDC7O00311 574 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 GRID2O43424 1007 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 CBX6O95503 412 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 FGF4P08620 206 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 RPS17P08708 135 aaKnown RBP13.43□□□□□ -0.26
HDAC6-215ENST00000465457 ENO2P09104 434 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-215ENST00000465457 T-ENOLP0DO92 83 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 LIFP15018 202 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 AKT1P31749 480 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 RALGDSQ12967 914 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 SP140Q13342 867 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 C16orf72Q14CZ0 275 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 ZRSR2Q15696 482 aaKnown RBP13.43□□□□□ -0.26
HDAC6-215ENST00000465457 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 HENMT1Q5T8I9 393 aaKnown RBP13.43□□□□□ -0.26
HDAC6-215ENST00000465457 HSD11B1LQ7Z5J1 315 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 TECPR1Q7Z6L1 1165 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 NLRP8Q86W28 1048 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 C10orf67Q8IYJ2 551 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 CLYBLQ8N0X4 340 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 Q8N9G6 341 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-215ENST00000465457 FAM174AQ8TBP5 190 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 GLMNQ92990 594 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 EXT2Q93063 718 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 MIB2Q96AX9 1013 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 MAELQ96JY0 434 aaKnown RBP13.43□□□□□ -0.26
HDAC6-215ENST00000465457 CCT7Q99832 543 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 C1QTNF2Q9BXJ5 285 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 LRRN3Q9H3W5 708 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 RDH14Q9HBH5 336 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 ZDHHC2Q9UIJ5 367 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 SRPK3Q9UPE1 567 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 HIVEP3Q5T1R4 2406 aa13.43□□□□□ -0.26
HDAC6-215ENST00000465457 FBN2P35556 2912 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 PABPN1LA6NDY0 278 aaKnown RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 ENO4A6NNW6 628 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 GPR39O43194 453 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 VPS4BO75351 444 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 GSTM1P09488 218 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 CCL4P13236 92 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 ATP1B2P14415 290 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 MSH3P20585 1137 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 EEF1DP29692 281 aaKnown RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 KCNC1P48547 511 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 THOP1P52888 689 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 PKNOX1P55347 436 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 GSTM4Q03013 218 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 ZFP36L1Q07352 338 aaKnown RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 TMEM52BQ4KMG9 183 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 DNAL1Q4LDG9 190 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 PLEKHS1Q5SXH7 462 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 NEK10Q6ZWH5 1172 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 PHYKPLQ8IUZ5 450 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 SLITRK4Q8IW52 837 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 CPSF7Q8N684 471 aaKnown RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 PDPRQ8NCN5 879 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 CEP70Q8NHQ1 597 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 ZNF483Q8TF39 744 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 BTN2A2Q8WVV5 523 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 FAM136AQ96C01 138 aa13.42□□□□□ -0.26
HDAC6-215ENST00000465457 SLC7A6OSQ96CW6 309 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-215ENST00000465457 COQ10AQ96MF6 247 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms