RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 TNFAIP3P21580 790 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 JAK1P23458 1154 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 MNDAP41218 407 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 SLC9A3P48764 834 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 LBX1P52954 281 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 ZNF415Q09FC8 603 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 SGCGQ13326 291 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 MTF1Q14872 753 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 IGSF11Q5DX21 431 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 RAB41Q5JT25 222 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 RNASEH2BQ5TBB1 312 aaKnown RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 FAM180BQ6P0A1 224 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 TEX38Q6PEX7 206 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 CEACAM19Q7Z692 300 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 FAM131BQ86XD5 332 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 ZFAND4Q86XD8 727 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 CATSPER3Q86XQ3 398 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 CEP57Q86XR8 500 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 RNF130Q86XS8 419 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 PRR22Q8IZ63 422 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 TIGD1Q96MW7 591 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 SDHCQ99643 169 aaPredicted RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 NAP1L4Q99733 375 aaKnown RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 OLFM1Q99784 485 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 RBM24Q9BX46 236 aaKnown RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 MAK16Q9BXY0 300 aaKnown RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 THAP2Q9H0W7 228 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 SYNCQ9H7C4 482 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 MTHFD2LQ9H903 347 aaPredicted RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 TBC1D17Q9HA65 648 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 FAM207AQ9NSI2 230 aaPredicted RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 SUCLA2Q9P2R7 463 aaPredicted RBP1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 LNPEPQ9UIQ6 1025 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 GTF3C4Q9UKN8 822 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 TSPAN16Q9UKR8 245 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 NME7Q9Y5B8 376 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 SELENOKQ9Y6D0 94 aa1.9□□□□□ -2.11
NDUFA4-202ENST00000463308 IQCMA0A1B0GVH7 501 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 FEZF1A0PJY2 475 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 B4DLN1 442 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PI4K2BG5E9Z4 385 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 MEIS2O14770 477 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 SLCO2B1O94956 709 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 TRUB2O95900 331 aaKnown RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 FOLR2P14207 255 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 DARSP14868 501 aaKnown RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 GJA1P17302 382 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PTPN3P26045 913 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PDHA2P29803 388 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PTGER4P35408 488 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 SLC15A1P46059 708 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 RPL34P49207 117 aaKnown RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 MRPL12P52815 198 aaKnown RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PNLIPRP2P54317 469 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 XGP55808 180 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 CA9Q16790 459 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PLEKHS1Q5SXH7 462 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 DHRS7BQ6IAN0 325 aaPredicted RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 UGT3A1Q6NUS8 523 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 C4orf50Q6ZRC1 276 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 TMPRSS11BQ86T26 416 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 NUDT13Q86X67 352 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 OR4N5Q8IXE1 308 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 C9orf43Q8TAL5 461 aaPredicted RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 C11orf45Q8TAV5 145 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 GATAD1Q8WUU5 269 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 APOBEC4Q8WW27 367 aaKnown RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 DHX58Q96C10 678 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 C1orf147Q96MC9 270 aaPredicted RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 HOXD1Q9GZZ0 328 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 MMP27Q9H306 513 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 OSGEPL1Q9H4B0 414 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 GNB4Q9HAV0 340 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 TRPV4Q9HBA0 871 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 TNFRSF19Q9NS68 423 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 GKN1Q9NS71 199 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 PSD3Q9NYI0 1048 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 WSB2Q9NYS7 404 aaPredicted RBP1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 ABCD2Q9UBJ2 740 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 STUB1Q9UNE7 303 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 SLC6A5Q9Y345 797 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 TRIM17Q9Y577 477 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 KAT6BQ8WYB5 2073 aa1.89□□□□□ -2.11
NDUFA4-202ENST00000463308 LOC100509620A0A075B734 347 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 TMEM221A6NGB7 291 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 CTDSP2O14595 271 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 ADAMDEC1O15204 470 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 GALR3O60755 368 aaPredicted RBP1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 SH3BGRLO75368 114 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 ERAL1O75616 437 aaKnown RBP1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 TRIM21P19474 475 aaKnown RBP1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 CSTF2P33240 577 aaKnown RBP eCLIP1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 NAP1L1P55209 391 aaKnown RBP1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 MAT1AQ00266 395 aaKnown RBP1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 CD300CQ08708 224 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 LMOD3Q0VAK6 560 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 C3AR1Q16581 482 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 ZNF74Q16587 644 aa1.88□□□□□ -2.11
NDUFA4-202ENST00000463308 SYT14P1Q58G82 188 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms