RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 NR4A2P43354 598 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 DSC1Q08554 894 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 NPRL3Q12980 569 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 CLLU1OSQ5K130 101 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 NCEH1Q6PIU2 408 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 BEND7Q8N7W2 519 aaPredicted RBP17.93■□□□□ 0.46
HPS3-204ENST00000462030 TRPV1Q8NER1 839 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 UBTD2Q8WUN7 234 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 IPCEF1Q8WWN9 437 aaPredicted RBP17.93■□□□□ 0.46
HPS3-204ENST00000462030 PROX1Q92786 737 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 HSH2DQ96JZ2 352 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 PITX2Q99697 317 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 ANKHQ9HCJ1 492 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 THUMPD1Q9NXG2 353 aaKnown RBP17.93■□□□□ 0.46
HPS3-204ENST00000462030 KLHL3Q9UH77 587 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 VPS4AQ9UN37 437 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 NUAK1O60285 661 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 VNN2O95498 520 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 VIPP01282 170 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 GRK5P34947 590 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 GJA8P48165 433 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 ZNF181Q2M3W8 571 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 C9orf131Q5VYM1 1079 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 RNF219Q5W0B1 726 aaPredicted RBP17.93■□□□□ 0.46
HPS3-204ENST00000462030 ZZZ3Q8IYH5 903 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 ZBTB2Q8N680 514 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 SELENOMQ8WWX9 145 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 DPH2Q9BQC3 489 aaPredicted RBP17.93■□□□□ 0.46
HPS3-204ENST00000462030 HOXD1Q9GZZ0 328 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 RNF167Q9H6Y7 350 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 AMBNQ9NP70 447 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 RNF6Q9Y252 685 aa17.93■□□□□ 0.46
HPS3-204ENST00000462030 BRCA2P51587 3418 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 MRPS14O60783 128 aaKnown RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 NBNO60934 754 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 STK16O75716 305 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 FKBP9O95302 570 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 GJB5O95377 273 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 CLDN9O95484 217 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 AKR1A1P14550 325 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 TCEA1P23193 301 aaKnown RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 HMGCLP35914 325 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 CAMK2GQ13555 558 aaPredicted RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 VMACQ2NL98 169 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 TTLL9Q3SXZ7 439 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 SOWAHCQ53LP3 525 aaPredicted RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 C6orf183Q5T699 404 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 CLIP4Q8N3C7 705 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 POP5Q969H6 163 aaKnown RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 COPS4Q9BT78 406 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ASB8Q9H765 288 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 LATS2Q9NRM7 1088 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 CAB39Q9Y376 341 aaPredicted RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 PCDHGA6Q9Y5G7 932 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ILVBLA1L0T0 632 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 MTMR11A4FU01 709 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 DSCR3O14972 297 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 KCNK5O95279 499 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 KRT6AP02538 564 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 KRT6BP04259 564 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ZDHHC11BP0C7U3 371 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 KDELR2P33947 212 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 UGT2B10P36537 528 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 KRT6CP48668 564 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 FAM189BP81408 668 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 IFITM2Q01629 132 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ATXN7L2Q5T6C5 722 aaPredicted RBP17.92■□□□□ 0.46
HPS3-204ENST00000462030 DESI1Q6ICB0 168 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 GPR153Q6NV75 609 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 GLB1LQ6UWU2 654 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 CERS6Q6ZMG9 384 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 SERPINA11Q86U17 422 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 APIPQ96GX9 242 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 NACA2Q9H009 215 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 REEP1Q9H902 201 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ITM2CQ9NQX7 267 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ZNF451Q9Y4E5 1061 aa17.92■□□□□ 0.46
HPS3-204ENST00000462030 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.91■□□□□ 0.46
HPS3-204ENST00000462030 EVPLLA8MZ36 301 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 TAF4O00268 1085 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 CLIC1O00299 241 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 CLDN11O75508 207 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 ENGP17813 658 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 RPS3P23396 243 aaKnown RBP eCLIP17.91■□□□□ 0.46
HPS3-204ENST00000462030 SLC19A1P41440 591 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 TUBA1BP68363 451 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 ZNF177Q13360 481 aaPredicted RBP17.91■□□□□ 0.46
HPS3-204ENST00000462030 TPRG1LQ5T0D9 272 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 PDE12Q6L8Q7 609 aaKnown RBP17.91■□□□□ 0.46
HPS3-204ENST00000462030 FAHD1Q6P587 224 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 RSPO2Q6UXX9 243 aaPredicted RBP17.91■□□□□ 0.46
HPS3-204ENST00000462030 RNF19BQ6ZMZ0 732 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 TUBA1AQ71U36 451 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 PTOV1Q86YD1 416 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 RBFAQ8N0V3 343 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 KCNC2Q96PR1 638 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 SLC29A3Q9BZD2 475 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 LHX3Q9UBR4 397 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 TESMINQ9Y4I5 508 aa17.91■□□□□ 0.46
HPS3-204ENST00000462030 DUSP11O75319 330 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms