RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FAM198BQ6UWH4 519 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 STRA8Q7Z7C7 330 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 MCATQ8IVS2 390 aaKnown RBP14.77□□□□□ -0.05
VARS-219ENST00000461328 PPFIBP2Q8ND30 876 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 EEF1AKMT1Q8WVE0 214 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 ASB11Q8WXH4 323 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 SELENOSQ9BQE4 189 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 NDC1Q9BTX1 674 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 TRIM4Q9C037 500 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 MRPS30Q9NP92 439 aaKnown RBP14.77□□□□□ -0.05
VARS-219ENST00000461328 NSMCE4AQ9NXX6 385 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 TXNDC16Q9P2K2 825 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 TAC3Q9UHF0 121 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 TCFL5Q9UL49 500 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 SRPK3Q9UPE1 567 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 PADI2Q9Y2J8 665 aa14.77□□□□□ -0.05
VARS-219ENST00000461328 TLN1Q9Y490 2541 aaKnown RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 H3BMH7 237 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
VARS-219ENST00000461328 PRICKLE3O43900 615 aaPredicted RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 C8GP07360 202 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 ERGP11308 486 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 IL2P60568 153 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 SP140Q13342 867 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 FAM69BQ5VUD6 431 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 FCRL6Q6DN72 434 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 RHBDD2Q6NTF9 364 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 ADCK2Q7Z695 626 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 SLC26A11Q86WA9 606 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 APLFQ8IW19 511 aaPredicted RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 TTC29Q8NA56 475 aaPredicted RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 FBXO15Q8NCQ5 510 aaPredicted RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 PROKR1Q8TCW9 393 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 MCOLN3Q8TDD5 553 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 CDKL2Q92772 493 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 DLG3Q92796 817 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 ZUFSPQ96AP4 578 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 C17orf62Q9BQA9 187 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 DHCR7Q9UBM7 475 aaKnown RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 NDOR1Q9UHB4 597 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 GPN3Q9UHW5 284 aaPredicted RBP14.76□□□□□ -0.05
VARS-219ENST00000461328 TP53TG5Q9Y2B4 290 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 VWA7Q9Y334 891 aa14.76□□□□□ -0.05
VARS-219ENST00000461328 SPTA1P02549 2419 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 A0A1W2PPV9 198 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 ARGFXA6NJG6 315 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 TARM1B6A8C7 271 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 GFYI3L273 518 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 DNAJB5O75953 348 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 ZIC2O95409 532 aaPredicted RBP14.75□□□□□ -0.05
VARS-219ENST00000461328 CAPN1P07384 714 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 CTSBP07858 339 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 FDXRP22570 491 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 SLC7A5Q01650 507 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 ZNF385CQ66K41 422 aaPredicted RBP14.75□□□□□ -0.05
VARS-219ENST00000461328 CPZQ66K79 652 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 CYHR1Q6ZMK1 362 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 OR2A1Q8NGT9 310 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 FBXO25Q8TCJ0 367 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 ZNF480Q8WV37 535 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 OLFM1Q99784 485 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 DPH7Q9BTV6 452 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 ACSS2Q9NR19 701 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 UTP6Q9NYH9 597 aaKnown RBP14.75□□□□□ -0.05
VARS-219ENST00000461328 TLK1Q9UKI8 766 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 ADAMTS6Q9UKP5 1117 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 PSAT1Q9Y617 370 aa14.75□□□□□ -0.05
VARS-219ENST00000461328 SPTBP11277 2137 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 A0A0J9YVX5 310 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 FAM95CA0A1B0GW59 222 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 ESYT3A0FGR9 886 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 KIF2AO00139 706 aaPredicted RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 EIF2S1P05198 315 aaKnown RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 HIST1H2AGP0C0S8 130 aaPredicted RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 NR1D1P20393 614 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 HIST1H2ADP20671 130 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 ALAS2P22557 587 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 IMPA1P29218 277 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 SSTR1P30872 391 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 PGGT1BP53609 377 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 SLC12A2P55011 1212 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 VSX2P58304 361 aaPredicted RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 DCDP81605 110 aaKnown RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 TIAL1Q01085 375 aaKnown RBP eCLIP14.74□□□□□ -0.05
VARS-219ENST00000461328 CHAF1BQ13112 559 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 GRM7Q14831 915 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 SLC9A5Q14940 896 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 TCTE1Q5JU00 501 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 MLIPQ5VWP3 458 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 ICE2Q659A1 982 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 TCTN3Q6NUS6 607 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 ZC3HC1Q86WB0 502 aaKnown RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 MNS1Q8NEH6 495 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 ADAMTS17Q8TE56 1095 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 ALKBH8Q96BT7 664 aaKnown RBP14.74□□□□□ -0.05
VARS-219ENST00000461328 HIST1H2AHQ96KK5 128 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 CCDC138Q96M89 665 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 GBP5Q96PP8 586 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 HIST1H2AJQ99878 128 aa14.74□□□□□ -0.05
VARS-219ENST00000461328 H2AFJQ9BTM1 129 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms