RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TRAP1Q12931 704 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 FOXI1Q12951 378 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 FHL3Q13643 280 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 RUNX3Q13761 415 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CCNIQ14094 377 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 DPYSQ14117 519 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 MESDQ14696 234 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 RPS6KA2Q15349 733 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 SMTNL2Q2TAL5 461 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKRD20A8PQ5CZ79 823 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 MS4A13Q5J8X5 152 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 KCNT1Q5JUK3 1230 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ALS2CLQ60I27 953 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 SFRP4Q6FHJ7 346 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 RGS7BPQ6MZT1 257 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CCBE1Q6UXH8 406 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 Q6ZS52 159 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 H2AFVQ71UI9 128 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 MTSS1LQ765P7 747 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 RD3Q7Z3Z2 195 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 BNIPLQ7Z465 357 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKS1BQ7Z6G8 1248 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CLNKQ7Z7G1 428 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CHSY1Q86X52 802 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 LGI2Q8N0V4 545 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 SCML4Q8N228 414 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CARNMT1Q8N4J0 409 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF366Q8N895 744 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 Q8NA96 180 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 TMEM171Q8WVE6 324 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 OSCP1Q8WVF1 389 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 SLC9A6Q92581 669 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CENPIQ92674 756 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 HTRA1Q92743 480 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 NT5C3BQ969T7 300 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 C3orf49Q96BT1 292 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 EFHD2Q96C19 240 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 CEP295NLQ96MC4 621 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 OLFM3Q96PB7 478 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 HIST1H2AAQ96QV6 131 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 PANX2Q96RD6 677 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ACOX2Q99424 681 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 UQCC2Q9BRT2 126 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 DRC3Q9H069 523 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 TKTL2Q9H0I9 626 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ANKZF1Q9H8Y5 726 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 TBC1D17Q9HA65 648 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 FSCN3Q9NQT6 498 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ARHGEF3Q9NR81 526 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ASNSD1Q9NWL6 643 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 TMEM160Q9NX00 188 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 EHD2Q9NZN4 543 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 VPS51Q9UID3 782 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ANAPC7Q9UJX3 599 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 VANGL2Q9ULK5 521 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 HPCAL4Q9UM19 191 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 DUSP12Q9UNI6 340 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 RPL26L1Q9UNX3 145 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 C19orf53Q9UNZ5 99 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 USP22Q9UPT9 525 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 LRRC42Q9Y546 428 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 TIMM22Q9Y584 194 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ZFP37Q9Y6Q3 630 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 NUMA1Q14980 2115 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 ZNF462Q96JM2 2506 aa4.76□□□□□ -1.65
ATPAF1-203ENST00000460928 DOCK4Q8N1I0 1966 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TEP1Q99973 2627 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 MACROD2A1Z1Q3 448 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 DPPA5A6NC42 116 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM90A18PA6NE21 464 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM90A16PA6NEW6 464 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM90A9PA6NNJ1 464 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PRSS47A8MTI9 375 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM90A5PA8MXJ8 464 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 B4E171 279 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 WASH3PC4AMC7 463 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 E7EVH7 732 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 GOLGA8TH3BQL2 631 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 KMOO15229 486 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TULP3O75386 442 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 LRCH4O75427 683 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 MOCS3O95396 460 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CISD3P0C7P0 127 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM90A15PP0C7V4 464 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 FAM90A14PP0C7W9 464 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CAPN3P20807 821 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ATP6V1C1P21283 382 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 HOXD9P28356 352 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ATP5DP30049 168 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PPIFP30405 207 aaKnown RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 UQCRC1P31930 480 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 TSPAN7P41732 249 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PPP3CCP48454 512 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 CCR5P51681 352 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 PGDP52209 483 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 VAMP2P63027 116 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 ELF3P78545 371 aaPredicted RBP4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 COG7P83436 770 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 DYRK1AQ13627 763 aa4.75□□□□□ -1.65
ATPAF1-203ENST00000460928 MLF2Q15773 248 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms