RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SPATA18Q8TC71 538 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 MAGEC3Q8TD91 643 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 RNF128Q8TEB7 428 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 PROX1Q92786 737 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 GDAP1L1Q96MZ0 367 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 ZNF559Q9BR84 538 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 ATG101Q9BSB4 218 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 SLC25A33Q9BSK2 321 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 ACKR4Q9NPB9 350 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 POT1Q9NUX5 634 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 HMG20BQ9P0W2 317 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 SPASTQ9UBP0 616 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 AGO1Q9UL18 857 aaKnown RBP2.8□□□□□ -1.96
HPS3-203ENST00000460822 WDR83OSQ9Y284 106 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 ITM2BQ9Y287 266 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 AMDHD2Q9Y303 409 aa2.8□□□□□ -1.96
HPS3-203ENST00000460822 THOC2Q8NI27 1593 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 FHOD3Q2V2M9 1422 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 SPATA31E1Q6ZUB1 1445 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 DHX29Q7Z478 1369 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 H0YIG0 161 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 CACNB4O00305 520 aaPredicted RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 DVL1O14640 695 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 INSIG1O15503 277 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ATP9AO75110 1047 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GAGE7O76087 117 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 KDM4BO94953 1096 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 C9P02748 559 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GAGE12FP0CL80 117 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GAGE12GP0CL81 117 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GAGE12IP0CL82 117 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 IGHV4-30-4P0DP06 118 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 PRF1P14222 555 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ETS1P14921 441 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 RPA1P27694 616 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 RFX2P48378 723 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 TDO2P48775 406 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 MMP15P51511 669 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ZNF132P52740 706 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 HMGN5P82970 282 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 EGR4Q05215 589 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ZNF415Q09FC8 603 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GAGE1Q13065 139 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GAGE4Q13068 117 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 TWIST1Q15672 202 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 MAPK11Q15759 364 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 INAQ16352 499 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 PTGISQ16647 500 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 XKR9Q5GH70 373 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ZNF704Q6ZNC4 412 aaPredicted RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 C1orf186Q6ZWK4 172 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 MARK2Q7KZI7 788 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 PHLDB2Q86SQ0 1253 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 COMMD2Q86X83 199 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ODF3L1Q8IXM7 274 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 RYBPQ8N488 228 aaPredicted RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 BMPERQ8N8U9 685 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 AMER3Q8N944 861 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 CLEC1AQ8NC01 280 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 OR52E1Q8NGJ3 308 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 OR14A16Q8NHC5 309 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 SPATA22Q8NHS9 363 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 CCDC110Q8TBZ0 833 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 KIAA1524Q8TCG1 905 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 SLC20A1Q8WUM9 679 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 FIG4Q92562 907 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 TANKQ92844 425 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 DHX58Q96C10 678 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 MTBPQ96DY7 904 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 THOC1Q96FV9 657 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 EEF2KMTQ96G04 330 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 KCNK16Q96T55 309 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 WACQ9BTA9 647 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 NYXQ9GZU5 481 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 DPH5Q9H2P9 285 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 POLE3Q9NRF9 147 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 GKN1Q9NS71 199 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 PNPLA3Q9NST1 481 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 TRMT6Q9UJA5 497 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 KCNK6Q9Y257 313 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 STRAPQ9Y3F4 350 aaKnown RBP2.79□□□□□ -1.96
HPS3-203ENST00000460822 OR2W1Q9Y3N9 320 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 JRKLQ9Y4A0 524 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 KIF14Q15058 1648 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 KDM5CP41229 1560 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 ARHGEF11O15085 1522 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 EHBP1L1Q8N3D4 1523 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 UGGT2Q9NYU1 1516 aa2.79□□□□□ -1.96
HPS3-203ENST00000460822 MYOM3Q5VTT5 1437 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 KIF7Q2M1P5 1343 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 MED19A0JLT2 244 aaPredicted RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 C15orf62A8K5M9 175 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 ANKRD66B4E2M5 251 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 PEX11AO75192 247 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 LIPFP07098 398 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 H1F0P07305 194 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 STAG3L1P0CL83 205 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 CCDC192P0DO97 292 aa2.78□□□□□ -1.96
HPS3-203ENST00000460822 HSPA8P11142 646 aaKnown RBP2.78□□□□□ -1.96
HPS3-203ENST00000460822 HOXB2P14652 356 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms