RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 PDPRQ8NCN5 879 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 TTLQ8NG68 377 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 OR2A1Q8NGT9 310 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 ZNF501Q96CX3 271 aaPredicted RBP10.3□□□□□ -0.76
UBR4-208ENST00000459947 IL17FQ96PD4 163 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 ZFYVE21Q9BQ24 234 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 PLCD4Q9BRC7 762 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 SPHK1Q9NYA1 384 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 WWOXQ9NZC7 414 aa10.3□□□□□ -0.76
UBR4-208ENST00000459947 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
UBR4-208ENST00000459947 A0A096LPK6 155 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 C21orf140B9A014 251 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 C9orf172C9J069 976 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 PEBP1P30086 187 aaKnown RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 TMPRSS3P57727 454 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 TBPL1P62380 186 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 CRTC2Q53ET0 693 aaPredicted RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 UBE2E3Q969T4 207 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 RERGQ96A58 199 aaPredicted RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 STK38LQ9Y2H1 464 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 C9J4A7 227 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 CLGNO14967 610 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 KIF1CO43896 1103 aaKnown RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 CDH16O75309 829 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 STK17BO94768 372 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 ITIH1P19827 911 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 GRIA3P42263 894 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 CSHL1Q14406 222 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 CEP97Q8IW35 865 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 SELENOSQ9BQE4 189 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 TXLNGQ9NUQ3 528 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 EURLQ9NYK6 297 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 CD274Q9NZQ7 290 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 TAC3Q9UHF0 121 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 RAB21Q9UL25 225 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 TMEM150CB9EJG8 249 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 PHGDHO43175 533 aaKnown RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 OR2B3O76000 313 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 C2P06681 752 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 NUDT17P0C025 328 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 TAC1P20366 129 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 GGT5P36269 586 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 CCR8P51685 355 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 NAE1Q13564 534 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 MROH9Q5TGP6 573 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 PAQR7Q86WK9 346 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 MCATQ8IVS2 390 aaKnown RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 LRRC56Q8IYG6 542 aaPredicted RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 CACNA2D3Q8IZS8 1091 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 MDM1Q8TC05 714 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 DCAKDQ8WVC6 231 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 MVB12AQ96EY5 273 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 ZNF285Q96NJ3 590 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 AIF1LQ9BQI0 150 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 NDC1Q9BTX1 674 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 ULBP3Q9BZM4 244 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 NT5DC2Q9H857 520 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 ACTR5Q9H9F9 607 aaPredicted RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 CLK4Q9HAZ1 481 aaKnown RBP10.29□□□□□ -0.76
UBR4-208ENST00000459947 DNAJC11Q9NVH1 559 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 IRAK4Q9NWZ3 460 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 PADI2Q9Y2J8 665 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 B3GALT1Q9Y5Z6 326 aa10.29□□□□□ -0.76
UBR4-208ENST00000459947 A0A1W2PPV9 198 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 TRIM49D1C9J1S8 452 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 SMIM24O75264 130 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 SCRG1O75711 98 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 IGHEP01854 428 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 RAB40ALP0C0E4 278 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 SLC35E2BP0CK96 405 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 HGFP14210 728 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 TSTA3Q13630 321 aaPredicted RBP10.28□□□□□ -0.76
UBR4-208ENST00000459947 PPP1R3AQ16821 1122 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 ZNF425Q6IV72 752 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 GPR87Q9BY21 358 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 EHD1Q9H4M9 534 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 PADI1Q9ULC6 663 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 PCDH17O14917 1159 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 FOLR1P15328 257 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 TFEBP19484 476 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 MAGP20916 626 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 EFTUD2Q15029 972 aaKnown RBP eCLIP10.28□□□□□ -0.76
UBR4-208ENST00000459947 TSNQ15631 228 aaKnown RBP10.28□□□□□ -0.76
UBR4-208ENST00000459947 DTX1Q86Y01 620 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 KRT78Q8N1N4 520 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 CAMKVQ8NCB2 501 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 AENQ8WTP8 325 aaKnown RBP10.28□□□□□ -0.76
UBR4-208ENST00000459947 DPH7Q9BTV6 452 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 SARGQ9BW04 601 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 ADAMTS6Q9UKP5 1117 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 RUVBL2Q9Y230 463 aaKnown RBP10.28□□□□□ -0.76
UBR4-208ENST00000459947 ADAMTS20P59510 1910 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 A0A1W2PNU3 283 aaPredicted RBP10.28□□□□□ -0.76
UBR4-208ENST00000459947 URADA6NGE7 173 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 ZNF891A8MT65 544 aaPredicted RBP10.28□□□□□ -0.76
UBR4-208ENST00000459947 CSRP3P50461 194 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 PPP1CAP62136 330 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 IFFO1Q0D2I5 559 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 SLC29A2Q14542 456 aa10.28□□□□□ -0.76
UBR4-208ENST00000459947 PHKG1Q16816 387 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms