RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 EPHA3P29320 983 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 CLNS1AP54105 237 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 EMP3P54852 163 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 STXBP1P61764 594 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ERVK-8P63133 956 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 BTKQ06187 659 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 RGS1Q08116 209 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 GRIK2Q13002 908 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 DDX39BQ13838 428 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 FZD2Q14332 565 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 GAS6Q14393 721 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SQLEQ14534 574 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TCEA2Q15560 299 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 AP5B1Q2VPB7 878 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 LSM12Q3MHD2 195 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPIN4Q56A73 249 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 FBXO48Q5FWF7 155 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZC3H12BQ5HYM0 836 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMTC4Q5T4D3 741 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 KANK2Q63ZY3 851 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ATG9BQ674R7 924 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 GRHL2Q6ISB3 625 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 CYB5D1Q6P9G0 228 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SUSD1Q6UWL2 747 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 C16orf89Q6UX73 402 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMIGD1Q6UXZ0 262 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 C11orf96Q7Z7L8 435 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SYVN1Q86TM6 617 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF687Q8N1G0 1237 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 PELI3Q8N2H9 469 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 L3MBTL4Q8NA19 623 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TRPV3Q8NET8 790 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 RP9Q8TA86 221 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZNF480Q8WV37 535 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 C10orf82Q8WW14 230 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 DNASE2BQ8WZ79 361 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZUFSPQ96AP4 578 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 KLHL29Q96CT2 875 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 MTFMTQ96DP5 389 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 CMTM7Q96FZ5 175 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 PDXPQ96GD0 296 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ZDHHC12Q96GR4 267 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 NSUN5Q96P11 429 aaKnown RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SORT1Q99523 831 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 CCDC3Q9BQI4 270 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC25A23Q9BV35 468 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ACAT2Q9BWD1 397 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 ROGDIQ9GZN7 287 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 EPB41L1Q9H4G0 881 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 RMND5AQ9H871 391 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 COPS7BQ9H9Q2 264 aaPredicted RBP5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 PELI2Q9HAT8 420 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 BRF2Q9HAW0 419 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TM7SF3Q9NS93 570 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TMEM45AQ9NWC5 275 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 GID8Q9NWU2 228 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 IRAK4Q9NWZ3 460 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 C1orf109Q9NX04 203 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 CPNE7Q9UBL6 633 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 VPS29Q9UBQ0 182 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TBC1D29Q9UFV1 150 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC23A2Q9UGH3 650 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TAC3Q9UHF0 121 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TAGLN3Q9UI15 199 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SLC12A4Q9UP95 1085 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 TIMM22Q9Y584 194 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 DNAJC15Q9Y5T4 150 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 SPACA6W5XKT8 324 aa5.65□□□□□ -1.5
RNU1-88P-201ENST00000459274 GOLGA4Q13439 2230 aaKnown RBP5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 ATP6AP2A0A1C7CYW4 349 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR6C74A6NCV1 312 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 CFAP73A6NFT4 308 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR52A4PA6NMU1 304 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 BBIP1A8MTZ0 92 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 E7ENX8 843 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 H0YIV9 168 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 K7ESF4 209 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 PSMD12O00232 456 aaPredicted RBP5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 MANBAO00462 879 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 PIP5K1BO14986 540 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 KHNYNO15037 678 aaKnown RBP5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 TAPBPO15533 448 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 OR1F1O43749 312 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 SLC22A3O75751 556 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 ATP6AP2O75787 350 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 RSL1D1O76021 490 aaKnown RBP5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 ANP32DO95626 131 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 SLC35G6P0C7Q6 338 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 NPPBP16860 134 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 CDH3P22223 829 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 ALDH4A1P30038 563 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 PRDX6P30041 224 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 AVPR2P30518 371 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 CA5AP35218 305 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 PIK3CBP42338 1070 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 GSTM5P46439 218 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 ASMTP46597 345 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 SLC6A12P48065 614 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 NXPH1P58417 271 aa5.64□□□□□ -1.51
RNU1-88P-201ENST00000459274 RPS15AP62244 130 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms