RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 AREGP15514 252 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TCF4P15884 667 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MYF6P23409 242 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 CCND3P30281 292 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 OTX2P32243 289 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 GTF2H1P32780 548 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 CDKN2CP42773 168 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SLC1A3P43003 542 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SUMO3P55854 103 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 SOX10P56693 466 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PHC1P78364 1004 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MRPS25P82663 173 aaKnown RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ZNF33AQ06730 810 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FCHO2Q0JRZ9 810 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 ALCAMQ13740 583 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FLOT2Q14254 428 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 GCKRQ14397 625 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PCLAFQ15004 111 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PDCD1Q15116 288 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 ARHGAP15Q53QZ3 475 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TMEM177Q53S58 311 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 BEX5Q5H9J7 111 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SPANXN2Q5MJ10 180 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 BRMS1LQ5PSV4 323 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TCHHL1Q5QJ38 904 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 GCNT6Q5T4J0 391 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 C6orf183Q5T699 404 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 C1orf146Q5VVC0 180 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 DENND2CQ68D51 928 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 DUPD1Q68J44 220 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FAM109BQ6ICB4 259 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ZNF530Q6P9A1 599 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 CCDC137Q6PK04 289 aaKnown RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 Q6ZRM9 215 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MTSS1LQ765P7 747 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TRILQ7L0X0 811 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 NDUFAF7Q7L592 441 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 KCNK18Q7Z418 384 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TRMT11Q7Z4G4 463 aaKnown RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ANKS1BQ7Z6G8 1248 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 ZNF575Q86XF7 245 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 NUDCD3Q8IVD9 361 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TIGD4Q8IY51 512 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SLC38A6Q8IZM9 456 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 CLYBLQ8N0X4 340 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 BATF2Q8N1L9 274 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 GALNT4Q8N4A0 578 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 KBTBD3Q8NAB2 608 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 NHLRC2Q8NBF2 726 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 OR2L3Q8NG85 312 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 OR13C3Q8NGS6 347 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 DTX3LQ8TDB6 740 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 DTD1Q8TEA8 209 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PROX1Q92786 737 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 GCDHQ92947 438 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ZG16BQ96DA0 208 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 C5orf30Q96GV9 206 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PCYT2Q99447 389 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FOXB1Q99853 325 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 BPIFA3Q9BQP9 254 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TUBGCP2Q9BSJ2 902 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FUZQ9BT04 418 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 LRRC1Q9BTT6 524 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SLC25A23Q9BV35 468 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 POTEKPQ9BYX7 375 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 CDT1Q9H211 546 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SLC6A15Q9H2J7 730 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 OR51B6Q9H340 312 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 RIMS4Q9H426 269 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 YTHDC2Q9H6S0 1430 aaKnown RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ASB8Q9H765 288 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 ECT2Q9H8V3 914 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PLCXD1Q9NUJ7 323 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FAM118AQ9NWS6 357 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SAE1Q9UBE0 346 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 CPNE7Q9UBL6 633 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 WNT16Q9UBV4 365 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 LIMA1Q9UHB6 759 aaKnown RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ENOPH1Q9UHY7 261 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MAGEL2Q9UJ55 1249 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 TINAGQ9UJW2 476 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 OSGIN1Q9UJX0 560 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 ADAM28Q9UKQ2 775 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FZD10Q9ULW2 581 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PCDHA6Q9UN73 950 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SNX7Q9UNH6 387 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PSMD13Q9UNM6 376 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 ZNF175Q9Y473 711 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 RBM8AQ9Y5S9 174 aaKnown RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 PFASO15067 1338 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ATXN2Q99700 1313 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 A0A0A6YYH2 397 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 BCLAF3A2AJT9 711 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 OOEPA6NGQ2 149 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ARHGAP42A6NI28 874 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 A6NJ64 397 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 LIPT2A6NK58 231 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 MYO1FO00160 1098 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms