RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 NXPE1Q8N323 547 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 C2orf73Q8N5S3 287 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ENDOVQ8N8Q3 282 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 FAM71DQ8N9W8 422 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ACRBPQ8NEB7 543 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 OR52E1Q8NGJ3 308 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ASB11Q8WXH4 323 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CDKN2AIPNLQ96HQ2 116 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 LINC00615Q96LM1 132 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SPATA13Q96N96 652 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 FCRL4Q96PJ5 515 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TBL1YQ9BQ87 522 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CCM2Q9BSQ5 444 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ANP32EQ9BTT0 268 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC25A23Q9BV35 468 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 GPR87Q9BY21 358 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SPRTNQ9H040 489 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ING2Q9H160 280 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 OR52A5Q9H2C5 316 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 COG4Q9H9E3 785 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 FAM60AQ9NP50 221 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ACSS2Q9NR19 701 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SMOXQ9NWM0 555 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SMARCAL1Q9NZC9 954 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SLAMF8Q9P0V8 285 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CIDEBQ9UHD4 219 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PLAGL1Q9UM63 463 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 AAR2Q9Y312 384 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 REXO2Q9Y3B8 237 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SETXQ7Z333 2677 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PTPN13Q12923 2485 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 HECTD1Q9ULT8 2610 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SPTBN1Q01082 2364 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 C17orf113A0A1B0GUU1 675 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 GRID2IPA4D2P6 1211 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CLEC18AA5D8T8 446 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 C21orf140B9A014 251 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 IFRD1O00458 451 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 BTN3A1O00481 513 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PJA2O43164 708 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF749O43361 778 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 OR1I1O60431 355 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 DNAJC8O75937 253 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 TJP3O95049 919 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 FTCDO95954 541 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SCG5P05408 212 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CBSLP0DN79 551 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 RALBP11234 206 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ETS1P14921 441 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ITGALP20701 1170 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PTMSP20962 102 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ACRV1P26436 265 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 RORAP35398 523 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CBSP35520 551 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CYLC1P35663 651 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 HADHAP40939 763 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 GRIA1P42261 906 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF460Q14592 562 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 POU6F1Q14863 301 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC9A5Q14940 896 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ZIC1Q15915 447 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PARP6Q2NL67 630 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 EIF2S3LQ2VIR3 472 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 DEFB110Q30KQ9 67 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF658BQ4V348 819 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PRR30Q53SZ7 412 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 RNF187Q5TA31 235 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 C1orf189Q5VU69 101 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 MLIPQ5VWP3 458 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 KCTD11Q693B1 232 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CLEC18BQ6UXF7 455 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ARHGEF18Q6ZSZ5 1173 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CDHR3Q6ZTQ4 885 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SYVN1Q86TM6 617 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 LDB1Q86U70 411 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 AMIGO1Q86WK6 493 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 KMT5CQ86Y97 462 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 WFDC3Q8IUB2 231 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CDKL3Q8IVW4 592 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 APLFQ8IW19 511 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC170Q8IYT3 715 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ADGRF3Q8IZF5 1079 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 DSELQ8IZU8 1212 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 FAM26EQ8N5C1 309 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ZBTB2Q8N680 514 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CLEC18CQ8NCF0 446 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ACVR1CQ8NER5 493 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 FDCSPQ8NFU4 85 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 OR52K1Q8NGK4 314 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 OR5AR1Q8NGP9 310 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CPT1CQ8TCG5 803 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 HM13Q8TCT9 377 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ADAMTS17Q8TE56 1095 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ZFPM2Q8WW38 1151 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 THAP4Q8WY91 577 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CPT1BQ92523 772 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 TFGQ92734 400 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 NINJ1Q92982 152 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ULK4Q96C45 1275 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 C19orf60Q96EN9 201 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms