RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CHST11Q9NPF2 352 aa7.67□□□□□ -1.18
NIF3L1-209ENST00000454952 C14orf105Q9NVL8 296 aa7.67□□□□□ -1.18
NIF3L1-209ENST00000454952 IMPACTQ9P2X3 320 aa7.67□□□□□ -1.18
NIF3L1-209ENST00000454952 CTSFQ9UBX1 484 aa7.67□□□□□ -1.18
NIF3L1-209ENST00000454952 MRPS2Q9Y399 296 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-209ENST00000454952 CRYBG3Q68DQ2 2970 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 A0A1W2PQ72 361 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 AP3B1O00203 1094 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 TXNDC9O14530 226 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 PRMT5O14744 637 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 PFDN6O15212 129 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 VPS26AO75436 327 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 BMP10O95393 424 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 METTL18O95568 372 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 MLYCDO95822 493 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 GOT2P00505 430 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 SERPINA7P05543 415 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CTSBP07858 339 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 ZGLP1P0C6A0 271 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 FBLP22087 321 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 AOAHP28039 575 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 FDFT1P37268 417 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 OR1D4P47884 311 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CSE1LP55060 971 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 RIPPLY3P57055 190 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 VSX2P58304 361 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 ACVR1Q04771 509 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 RBPJQ06330 500 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 KLC1Q07866 573 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 LONRF1Q17RB8 773 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 WASHC2DQ5SRD0 308 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 TSTD2Q5T7W7 516 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 SP5Q6BEB4 398 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 PTRHD1Q6GMV3 140 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CNSTQ6PJW8 725 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 LINC00696Q6ZRV3 163 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 COX15Q7KZN9 410 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 PEX26Q7Z412 305 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 FJX1Q86VR8 437 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 MCEMP1Q8IX19 187 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 PPHLN1Q8NEY8 458 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 OR13J1Q8NGT2 312 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 DNAJB8Q8NHS0 232 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CFAP61Q8NHU2 1237 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 STT3BQ8TCJ2 826 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 SKA2Q8WVK7 121 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 NR4A3Q92570 626 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 HAS2Q92819 552 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 HDAC10Q969S8 669 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 FAM118BQ9BPY3 351 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 MENTQ9BUN1 341 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 RNF32Q9H0A6 362 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 TSPY26PQ9H489 355 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 ZNF160Q9HCG1 818 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 RIC8BQ9NVN3 520 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 SPATA7Q9P0W8 599 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 TEKT2Q9UIF3 430 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 GNPTGQ9UJJ9 305 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 C3orf18Q9UK00 162 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 AMFRQ9UKV5 643 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 KLHL20Q9Y2M5 609 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CSAG2Q9Y5P2 127 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CELSR2Q9HCU4 2923 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 CPAMD8Q8IZJ3 1885 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 HEATR5BQ9P2D3 2071 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 PKDREJQ9NTG1 2253 aa7.66□□□□□ -1.18
NIF3L1-209ENST00000454952 IGLV3-12A0A075B6K2 115 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 OR51F1A6NGY5 319 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 ZNF839A8K0R7 811 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 RNF223E7ERA6 249 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 MASP2O00187 686 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 OR1I1O60431 355 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 ALOX12BO75342 701 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 WFS1O76024 890 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 SUN1O94901 812 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 CCNDBP1O95273 360 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 CYC1P08574 325 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 ANXA5P08758 320 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 PRR35P0CG20 571 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 PKMP14618 531 aaKnown RBP7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 MCM3P25205 808 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 CMPK1P30085 196 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 HSD17B2P37059 387 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 GRIA3P42263 894 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 TNFSF10P50591 281 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 EMP2P54851 167 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 FOXL2P58012 376 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 ZXDCQ2QGD7 858 aaPredicted RBP7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 CCDC38Q502W7 563 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 GARNL3Q5VVW2 1013 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 ATG9BQ674R7 924 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 ZNF324BQ6AW86 544 aaPredicted RBP7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 TMEM207Q6UWW9 146 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 GFRALQ6UXV0 394 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 NAPRTQ6XQN6 538 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 BNC2Q6ZN30 1099 aaPredicted RBP7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 SHISA6Q6ZSJ9 500 aa7.65□□□□□ -1.18
NIF3L1-209ENST00000454952 RNF44Q7L0R7 432 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms