RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SGO1Q5FBB7 561 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ANKRD26P1Q6NSI1 321 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SPESP1Q6UW49 350 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 CCDC149Q6ZUS6 474 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ZNF551Q7Z340 670 aaPredicted RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 TMEM179BQ7Z7N9 219 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ZZZ3Q8IYH5 903 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ATL1Q8WXF7 558 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 APIPQ96GX9 242 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 INPP5KQ9BT40 448 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 ZBP1Q9H171 429 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 SIRT5Q9NXA8 310 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 GALNT8Q9NY28 637 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 BTNL2Q9UIR0 455 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 TBX21Q9UL17 535 aa12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 RUVBL1Q9Y265 456 aaKnown RBP12.16□□□□□ -0.46
ECHDC1-209ENST00000454591 A0A1W2PPW3 197 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PABPN1LA6NDY0 278 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 SLC1A7O00341 560 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 RFXANKO14593 260 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 GNGT2O14610 69 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CTSAP10619 480 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 FPR1P21462 350 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PCMT1P22061 227 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PPIBP23284 216 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CTSOP43234 321 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 STT3AP46977 705 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 EPHA5P54756 1037 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PLIN5Q00G26 463 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 NEDD8Q15843 81 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 UGT8Q16880 541 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 VMACQ2NL98 169 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 FGD3Q5JSP0 725 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 GRHL2Q6ISB3 625 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CAPN13Q6MZZ7 669 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CES5AQ6NT32 575 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 DPY19L3Q6ZPD9 716 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CBLL1Q75N03 491 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 EIF3MQ7L2H7 374 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 RTL10Q7L3V2 364 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CYP2U1Q7Z449 544 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 ANKRD13BQ86YJ7 626 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 ZDHHC21Q8IVQ6 265 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PHACTR4Q8IZ21 702 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 C10orf111Q8N326 155 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 TRAM1L1Q8N609 369 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PAF1Q8N7H5 531 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 FBXO15Q8NCQ5 510 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 PIK3C3Q8NEB9 887 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 ASZ1Q8WWH4 475 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 TANKQ92844 425 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 GLMNQ92990 594 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 VPS35Q96QK1 796 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 TBCDQ9BTW9 1192 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 LHPPQ9H008 270 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 AASDHPPTQ9NRN7 309 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 FAIMQ9NVQ4 179 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 UTS2RQ9UKP6 389 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 FAF1Q9UNN5 650 aaPredicted RBP12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 CORO2BQ9UQ03 480 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 B3GNT3Q9Y2A9 372 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 ORC6Q9Y5N6 252 aa12.15□□□□□ -0.46
ECHDC1-209ENST00000454591 MTCL1Q9Y4B5 1905 aaKnown RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 SCAMP3O14828 347 aaKnown RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 EFCAB14O75071 495 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 FKTNO75072 461 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 KCNK5O95279 499 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 FGF19O95750 216 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 ZNF12P17014 697 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 DNAJA1P31689 397 aaKnown RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 CDKN2CP42773 168 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 IST1P53990 364 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 VAC14Q08AM6 782 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 CHIT1Q13231 466 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 SPOUT1Q5T280 376 aaKnown RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 HENMT1Q5T8I9 393 aaKnown RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 GDPD4Q6W3E5 623 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 DNAJC14Q6Y2X3 702 aaPredicted RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 RFLNAQ6ZTI6 216 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 DEFB128Q7Z7B8 93 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 PTOV1Q86YD1 416 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 VRK3Q8IV63 474 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 HS6ST3Q8IZP7 471 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 CLHC1Q8NHS4 586 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 TRUB1Q8WWH5 349 aaKnown RBP12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 NCLNQ969V3 563 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 CXorf40BQ96DE9 158 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 CCDC138Q96M89 665 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 TSSK3Q96PN8 268 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 PITX2Q99697 317 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 P2RY13Q9BPV8 354 aa12.14□□□□□ -0.47
ECHDC1-209ENST00000454591 SLC46A2Q9BY10 475 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms