RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 MRPS30Q9NP92 439 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 ATP13A2Q9NQ11 1180 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 SLAMF7Q9NQ25 335 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 SLC22A11Q9NSA0 550 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 UTP6Q9NYH9 597 aaKnown RBP12.34□□□□□ -0.43
CHD3-206ENST00000452447 C5AR2Q9P296 337 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 KLHL42Q9P2K6 505 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 CDC23Q9UJX2 597 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 COMMD10Q9Y6G5 202 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 NUP210LQ5VU65 1888 aa12.34□□□□□ -0.43
CHD3-206ENST00000452447 USP9YO00507 2555 aaPredicted RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 SVILO95425 2214 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 AGPSO00116 658 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 MYO1CO00159 1063 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 VPS26AO75436 327 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 SYF2O95926 243 aaKnown RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 UMODP07911 640 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 F7P08709 466 aaPredicted RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 ERVK-10P10266 1014 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 ENO3P13929 434 aaPredicted RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 MMP11P24347 488 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 SLC1A2P43004 574 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 CUL1Q13616 776 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 MYBPC3Q14896 1274 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 VWA5B1Q5TIE3 1220 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 FRMPD2BQ6IN97 320 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 JMJD6Q6NYC1 403 aaPredicted RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 PPP1R32Q7Z5V6 425 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 GALNT16Q8N428 558 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 METTL27Q8N6F8 245 aaPredicted RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHD3-206ENST00000452447 GABPB2Q8TAK5 448 aaPredicted RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 COL26A1Q96A83 441 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 SIGLEC10Q96LC7 697 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 ZFYVE21Q9BQ24 234 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 ENAMQ9NRM1 1142 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 TRMT1Q9NXH9 659 aaKnown RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 ASIC3Q9UHC3 531 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 NXT1Q9UKK6 140 aaKnown RBP12.33□□□□□ -0.44
CHD3-206ENST00000452447 SNX12Q9UMY4 172 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 HIVEP3Q5T1R4 2406 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 PCSK5Q92824 1860 aa12.33□□□□□ -0.44
CHD3-206ENST00000452447 ICE1Q9Y2F5 2266 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 LOC105369274A0A096LPK9 316 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 LOC102723532A0A0G2JNH3 316 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 OR2A25A4D2G3 310 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 CES2O00748 559 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 ZBTB14O43829 449 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 IPO13O94829 963 aaKnown RBP12.32□□□□□ -0.44
CHD3-206ENST00000452447 SORBS2O94875 1100 aaKnown RBP12.32□□□□□ -0.44
CHD3-206ENST00000452447 CCNDBP1O95273 360 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 ONECUT2O95948 504 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 ERGP11308 486 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 ITGAXP20702 1163 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 OR1D4P47884 311 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 YBX1P67809 324 aaKnown RBP12.32□□□□□ -0.44
CHD3-206ENST00000452447 NKG7Q16617 165 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 MUM1Q2TAK8 710 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 HSP90AA5PQ58FG0 334 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 RNF44Q7L0R7 432 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 PCGF5Q86SE9 256 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 KCNMB4Q86W47 210 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 OR4N4Q8N0Y3 316 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 RBMXL3Q8N7X1 1067 aaKnown RBP12.32□□□□□ -0.44
CHD3-206ENST00000452447 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.32□□□□□ -0.44
CHD3-206ENST00000452447 TM9SF4Q92544 642 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 INPP5DQ92835 1189 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 PNPLA2Q96AD5 504 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 VPS50Q96JG6 964 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 PKP4Q99569 1192 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 SLC30A3Q99726 388 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 FAM167BQ9BTA0 163 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 SLC26A1Q9H2B4 701 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 SOX17Q9H6I2 414 aaPredicted RBP12.32□□□□□ -0.44
CHD3-206ENST00000452447 ZNF304Q9HCX3 659 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 MAP10Q9P2G4 905 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 FBXO5Q9UKT4 447 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 DHRS7Q9Y394 339 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 MAU2Q9Y6X3 613 aa12.32□□□□□ -0.44
CHD3-206ENST00000452447 NRP2O60462 931 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 HAUS5O94927 633 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 SLC16A8O95907 504 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 MPC1LP0DKB6 136 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 PGAM1P18669 254 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 VARSP26640 1264 aaKnown RBP12.31□□□□□ -0.44
CHD3-206ENST00000452447 MPP1Q00013 466 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 OCA2Q04671 838 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 AIMP2Q13155 320 aaKnown RBP12.31□□□□□ -0.44
CHD3-206ENST00000452447 PTK6Q13882 451 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 RNASEH2BQ5TBB1 312 aaKnown RBP12.31□□□□□ -0.44
CHD3-206ENST00000452447 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 ICE2Q659A1 982 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 SLC6A19Q695T7 634 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 UGT3A1Q6NUS8 523 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 PRMT9Q6P2P2 845 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 FBXO42Q6P3S6 717 aa12.31□□□□□ -0.44
CHD3-206ENST00000452447 ZNF549Q6P9A3 640 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms