RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 DHCR7Q9UBM7 475 aaKnown RBP13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 ADAMTS6Q9UKP5 1117 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 PDE10AQ9Y233 779 aa13.49□□□□□ -0.25
RTFDC1-204ENST00000449062 HEATR5BQ9P2D3 2071 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 ZBTB14O43829 449 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 MED26O95402 600 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 C1QAP02745 245 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 FDXRP22570 491 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 IMPA1P29218 277 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 MGAT5Q09328 741 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 NCF4Q15080 339 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 NKAIN1Q4KMZ8 207 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 UGT3A1Q6NUS8 523 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 TMEM207Q6UWW9 146 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 CYS1Q717R9 158 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 RNF44Q7L0R7 432 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 ZNF605Q86T29 641 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 PAQR7Q86WK9 346 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 RAB42Q8N4Z0 105 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 GABPB2Q8TAK5 448 aaPredicted RBP13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 PROKR1Q8TCW9 393 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 THAP4Q8WY91 577 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 SEC14L1Q92503 715 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 ABHD17AQ96GS6 310 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 PDLIM5Q96HC4 596 aaKnown RBP13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 OLFM1Q99784 485 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 PLCD4Q9BRC7 762 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 ACAT2Q9BWD1 397 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 SMYD2Q9NRG4 433 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 TRMT6Q9UJA5 497 aaKnown RBP13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 SRPK3Q9UPE1 567 aa13.48□□□□□ -0.25
RTFDC1-204ENST00000449062 K7EM74 188 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 SLC16A5O15375 505 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 PLA2G2AP14555 144 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 PMS2P54278 862 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 C2orf54Q08AI8 447 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 TCTE1Q5JU00 501 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 WASHC2DQ5SRD0 308 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 HECTD2Q5U5R9 776 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 ICE2Q659A1 982 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 UBE2R2Q712K3 238 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 ZC3HC1Q86WB0 502 aaKnown RBP13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 ARHGEF39Q8N4T4 335 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 PPFIBP2Q8ND30 876 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 N4BP2L2Q92802 583 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 OR2A5Q96R48 311 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 DHRS4Q9BTZ2 278 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 TRIM55Q9BYV6 548 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 DPH5Q9H2P9 285 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 PARVBQ9HBI1 364 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 MLXIPLQ9NP71 852 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 TLK1Q9UKI8 766 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 CORO1CQ9ULV4 474 aaPredicted RBP13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
RTFDC1-204ENST00000449062 NDC80O14777 642 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 EIF3HO15372 352 aaKnown RBP eCLIP13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 SUV39H1O43463 412 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 AGXTP21549 392 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 CMPK1P30085 196 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 ARSFP54793 590 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 VSX2P58304 361 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 ABATP80404 500 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 GUCY2DQ02846 1103 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 NFATC3Q12968 1075 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 PHKG1Q16816 387 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 YOD1Q5VVQ6 348 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 LRRC8EQ6NSJ5 796 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 ZDHHC24Q6UX98 284 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 TTLL10Q6ZVT0 673 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 ZBED8Q8IZ13 594 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 MCOLN3Q8TDD5 553 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 CCDC138Q96M89 665 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 SELENOSQ9BQE4 189 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 NDC1Q9BTX1 674 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 MRPS30Q9NP92 439 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 PPANQ9NQ55 473 aaKnown RBP13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 CUTCQ9NTM9 273 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 STOX2Q9P2F5 926 aaPredicted RBP13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 ANKMY1Q9P2S6 941 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 TAC3Q9UHF0 121 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 CDC23Q9UJX2 597 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 SNX7Q9UNH6 387 aa13.46□□□□□ -0.25
RTFDC1-204ENST00000449062 CCDC88CQ9P219 2028 aa13.46□□□□□ -0.26
RTFDC1-204ENST00000449062 A0A0J9YVX5 310 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 A0A1B0GX78 115 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 ZNF839A8K0R7 811 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 CXorf49A8MYA2 514 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 H0YGG7 62 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 DSCR3O14972 297 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 PIAS1O75925 651 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 WISP3O95389 354 aaPredicted RBP13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 C8GP07360 202 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 UMODP07911 640 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 NPPBP16860 134 aa13.45□□□□□ -0.26
RTFDC1-204ENST00000449062 SSTR1P30872 391 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms