RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 MED16Q9Y2X0 877 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 DOCK3Q8IZD9 2030 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 IGLV3-10A0A075B6K4 115 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 M0R129 80 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 ALOX5P09917 674 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 RAB15P59190 212 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 AQP6Q13520 282 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 GANABQ14697 944 aaKnown RBP11.55□□□□□ -0.56
MSH6-204ENST00000445503 RUNDC3AQ59EK9 446 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 ARMC4Q5T2S8 1044 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 SBSNQ6UWP8 590 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 OR9Q1Q8NGQ5 310 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 RDH12Q96NR8 316 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 HEPHQ9BQS7 1158 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 FZD4Q9ULV1 537 aa11.55□□□□□ -0.56
MSH6-204ENST00000445503 ZNF638Q14966 1978 aaKnown RBP11.55□□□□□ -0.56
MSH6-204ENST00000445503 FPR1P21462 350 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 KDELR2P33947 212 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 HMGCLP35914 325 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 CLCN7P51798 805 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 FRG2Q64ET8 278 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 CEP68Q76N32 757 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 DDX53Q86TM3 631 aaKnown RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 AKAP14Q86UN6 197 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 APCDD1Q8J025 514 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 BEND7Q8N7W2 519 aaPredicted RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 OR5AK3PQ8NH89 298 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 RHBDF1Q96CC6 855 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 FRG2BQ96QU4 278 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 PKMYT1Q99640 499 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 BARD1Q99728 777 aaKnown RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 ACPTQ9BZG2 426 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 KCNH6Q9H252 994 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 INTS6Q9UL03 887 aaKnown RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 CDH7Q9ULB5 785 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 OARD1Q9Y530 152 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 ZNF840PA6NDX5 716 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 PDZK1P1A8MUH7 402 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 PSMD11O00231 422 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 TSPAN12O95859 305 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 NNMTP40261 264 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 NSG1P42857 185 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 AP1S1P61966 158 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 ATG9BQ674R7 924 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 ADCK2Q7Z695 626 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 RIMKLAQ8IXN7 391 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 SPATA17Q96L03 361 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 MBOAT4Q96T53 435 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 CSF3RQ99062 836 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 GORASP2Q9H8Y8 452 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 TPT1P8Q9HAU6 139 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 MIEF1Q9NQG6 463 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 SLC25A37Q9NYZ2 338 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 CFAP97Q9P2B7 532 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 FAM92AA1XBS5 289 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 BPIP17213 487 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 EPORP19235 508 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 STK19P49842 368 aaPredicted RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 ARF5P84085 180 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 SETMARQ53H47 684 aaPredicted RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 ZNF648Q5T619 568 aaPredicted RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 C6orf183Q5T699 404 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 NOXRED1Q6NXP6 359 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 NCEH1Q6PIU2 408 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 RSPO2Q6UXX9 243 aaPredicted RBP11.54□□□□□ -0.56
MSH6-204ENST00000445503 TMPRSS11BQ86T26 416 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 OR4K1Q8NGD4 311 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 ZFYVE19Q96K21 471 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 DUSP26Q9BV47 211 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 TLR9Q9NR96 1032 aa11.54□□□□□ -0.56
MSH6-204ENST00000445503 SNRPD1P62314 119 aaKnown RBP11.53□□□□□ -0.56
MSH6-204ENST00000445503 ELP6Q0PNE2 266 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 UAP1L1Q3KQV9 507 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 CARD16Q5EG05 197 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 KIAA1614Q5VZ46 1190 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 LRRC66Q68CR7 880 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 B3GNT8Q7Z7M8 397 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 GATAD2AQ86YP4 633 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 C1orf52Q8N6N3 182 aaKnown RBP11.53□□□□□ -0.56
MSH6-204ENST00000445503 PHF10Q8WUB8 498 aaKnown RBP11.53□□□□□ -0.56
MSH6-204ENST00000445503 CHPT1Q8WUD6 406 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 DACT3Q96B18 629 aaPredicted RBP11.53□□□□□ -0.56
MSH6-204ENST00000445503 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 NDEL1Q9GZM8 345 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 SLC6A13Q9NSD5 602 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 RHCGQ9UBD6 479 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 A0A096LPI6 279 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.53□□□□□ -0.56
MSH6-204ENST00000445503 TAPBPO15533 448 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 ACLYP53396 1101 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 CYP4F8P98187 520 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 VMACQ2NL98 169 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 ZNF284Q2VY69 593 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 RTN4RL1Q86UN2 441 aaPredicted RBP11.53□□□□□ -0.56
MSH6-204ENST00000445503 NXPE1Q8N323 547 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
MSH6-204ENST00000445503 ACTL8Q9H568 366 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms