RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 TREX1Q9NSU2 369 aa13.52□□□□□ -0.25
SMARCAL1-210ENST00000445153 PLA2G3Q9NZ20 509 aa13.52□□□□□ -0.25
SMARCAL1-210ENST00000445153 GALPQ9UBC7 116 aa13.52□□□□□ -0.25
SMARCAL1-210ENST00000445153 NXT1Q9UKK6 140 aaKnown RBP13.52□□□□□ -0.25
SMARCAL1-210ENST00000445153 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.25
SMARCAL1-210ENST00000445153 OR2A25A4D2G3 310 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 E7EVH7 732 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 F8W8V4 182 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 GAS8O95995 478 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 HPP00738 406 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 APRTP07741 180 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 CELA2AP08217 269 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 ARNTP27540 789 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 KCNJ1P48048 391 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 EFNA3P52797 238 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 SESN2P58004 480 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 SNRPNP63162 240 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 PRTGQ2VWP7 1150 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 PCID2Q5JVF3 399 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 B3GNTL1Q67FW5 361 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 SP5Q6BEB4 398 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 CNSTQ6PJW8 725 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 RNF44Q7L0R7 432 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 NLRP9Q7RTR0 991 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 SHISA5Q8N114 240 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 PEX13Q92968 403 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 MIEF2Q96C03 454 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 BIRC8Q96P09 236 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 LMF1Q96S06 567 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 TSSK1BQ9BXA7 367 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 EPS8L2Q9H6S3 715 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 IL1RAPL1Q9NZN1 696 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 TSR3Q9UJK0 312 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 ANAPC5Q9UJX4 755 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 ZNF148Q9UQR1 794 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 SVILO95425 2214 aa13.51□□□□□ -0.25
SMARCAL1-210ENST00000445153 IGLV3-12A0A075B6K2 115 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 TCRBV7S3A2A0A539 114 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 H0YGG7 62 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 FKBP9O95302 570 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 F10P00742 488 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 STSP08842 583 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 COX6A1P12074 109 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 ACPPP15309 386 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 RPS3P23396 243 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 TNFRSF8P28908 595 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 SOX11P35716 441 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 PPARGP37231 505 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 CARSP49589 748 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 TTPAP49638 278 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 TDGF1P3P51864 188 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 ARF3P61204 181 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 CCZ1BP86790 482 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 TMED2Q15363 201 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 AARS2Q5JTZ9 985 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 IRAK1BP1Q5VVH5 260 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 RPUSD3Q6P087 351 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 CES3Q6UWW8 571 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 FJX1Q86VR8 437 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 PPHLN1Q8NEY8 458 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 BRIX1Q8TDN6 353 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 SKA2Q8WVK7 121 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 FAM136AQ96C01 138 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 TRIM56Q9BRZ2 755 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 DPH7Q9BTV6 452 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 ACAT2Q9BWD1 397 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 LZTFL1Q9NQ48 299 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 PTGFRNQ9P2B2 879 aa13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 ZNF282Q9UDV7 671 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-210ENST00000445153 ARHGAP10A1A4S6 786 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 GOLGA8KD6RF30 607 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 GOLGA8TH3BQL2 631 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 NIPSNAP2O75323 286 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 NDUFS3O75489 264 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 JRKO75564 520 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 WISP2O76076 250 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 MATN4O95460 622 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 F7P08709 466 aaPredicted RBP13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 PRR35P0CG20 571 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 FMO4P31512 558 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 EIF3BP55884 814 aaKnown RBP13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 KCNK10P57789 538 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 OCA2Q04671 838 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 GBX1Q14549 363 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 RPS6KA1Q15418 735 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 HKDC1Q2TB90 917 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 TTC23LQ6PF05 361 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 SUSD1Q6UWL2 747 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 OTOAQ7RTW8 1153 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 KBTBD2Q8IY47 623 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 ARHGEF39Q8N4T4 335 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 SIRT6Q8N6T7 355 aa13.49□□□□□ -0.25
SMARCAL1-210ENST00000445153 COG1Q8WTW3 980 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms