RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 XKR5Q6UX68 686 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 SLCO4C1Q6ZQN7 724 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 RALGPS2Q86X27 583 aaPredicted RBP15.18■□□□□ 0.02
SNX13-204ENST00000444712 CACUL1Q86Y37 369 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 GTF2H4Q92759 462 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 FOXJ1Q92949 421 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 UBE2E3Q969T4 207 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 ERLEC1Q96DZ1 483 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 OR52E6Q96RD3 313 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 Q9H521 79 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 C8orf33Q9H7E9 229 aaPredicted RBP15.18■□□□□ 0.02
SNX13-204ENST00000444712 ACSL5Q9ULC5 683 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 ANTXRLA6NF34 631 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 HNRNPRO43390 633 aaKnown RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 GMNNO75496 209 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 MYCLP1P12525 358 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 SDC1P18827 310 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 DRD1P21728 446 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 ACSM2AQ08AH3 577 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SPIN4Q56A73 249 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 C2orf27AQ580R0 203 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 MTX3Q5HYI7 312 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 ACSM2BQ68CK6 577 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 LPCAT2Q7L5N7 544 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 TMPRSS11BQ86T26 416 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 TP53I13Q8NBR0 393 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 PHC3Q8NDX5 983 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 N4BP2L2Q92802 583 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 APIPQ96GX9 242 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 ITCHQ96J02 903 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 APOLD1Q96LR9 279 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 PKP2Q99959 881 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 HAUS8Q9BT25 410 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 C1QTNF2Q9BXJ5 285 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 KCNH6Q9H252 994 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 ZNF576Q9H609 170 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 PREBQ9HCU5 417 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 CCM2LQ9NUG4 571 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 MAN2B2Q9Y2E5 1009 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 DLGAP4Q9Y2H0 992 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 PCDHB3Q9Y5E6 796 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 DHRS12A0PJE2 317 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 C1GALT1C1LP0DN25 315 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 FCGR1AP12314 374 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 HOXB2P14652 356 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 ASMTP46597 345 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 C21orf58P58505 322 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SRSF11Q05519 484 aaKnown RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 DMPKQ09013 629 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 NUMA1Q14980 2115 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SLC44A4Q53GD3 710 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 TMEM196Q5HYL7 178 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 METRNLQ641Q3 311 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 LCTLQ6UWM7 567 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SYT12Q8IV01 421 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 TMEM132CQ8N3T6 1108 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 RAB42Q8N4Z0 105 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 TMEM102Q8N9M5 508 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 SMRP1Q8NCR6 262 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 TFGQ92734 400 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 EZH1Q92800 747 aaPredicted RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 POP5Q969H6 163 aaKnown RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 NEIL2Q969S2 332 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 PPM1MQ96MI6 270 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SLAMF8Q9P0V8 285 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SPATA7Q9P0W8 599 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 SERGEFQ9UGK8 458 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 EGFL7Q9UHF1 273 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 FZD4Q9ULV1 537 aa15.17■□□□□ 0.02
SNX13-204ENST00000444712 ZFR2Q9UPR6 939 aaKnown RBP15.17■□□□□ 0.02
SNX13-204ENST00000444712 PCM1Q15154 2024 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 H0YJX3 145 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 FOXE1O00358 373 aaPredicted RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 SLC35G4P0C7Q5 338 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 UQCRBP14927 111 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 NPPBP16860 134 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 MRPS21P82921 87 aaKnown RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 TAP2Q03519 686 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 SFT2D3Q587I9 215 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 FAM83HQ6ZRV2 1179 aaPredicted RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 GPR180Q86V85 440 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 IFNEQ86WN2 208 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 LILRA2Q8N149 483 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 KRTCAP2Q8N6L1 136 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 OR7G3Q8NG95 312 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 OR5K2Q8NHB8 316 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 OR14C36Q8NHC7 312 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 SLC5A11Q8WWX8 675 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 ASB12Q8WXK4 309 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 TMEM74Q96NL1 305 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 TSSK3Q96PN8 268 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 TIMM29Q9BSF4 260 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.16■□□□□ 0.02
SNX13-204ENST00000444712 NCKAP1Q9Y2A7 1128 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 TSC22D4Q9Y3Q8 395 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 CROCCQ5TZA2 2017 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 A0A096LPI6 279 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 PCNAP12004 261 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 LTBRP36941 435 aa15.16■□□□□ 0.02
SNX13-204ENST00000444712 AQP4P55087 323 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms