RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SQLEQ14534 574 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 RPS6KA2Q15349 733 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRRT3Q5FWE3 981 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 WDR45BQ5MNZ6 344 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 FRG2Q64ET8 278 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLCO4C1Q6ZQN7 724 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 LPCAT2Q7L5N7 544 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TAF8Q7Z7C8 310 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 NRROSQ86YC3 692 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TRIM48Q8IWZ4 208 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 CPSF7Q8N684 471 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 FNDC5Q8NAU1 212 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 GPBAR1Q8TDU6 330 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLC5A11Q8WWX8 675 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 USP7Q93009 1102 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 KLHL29Q96CT2 875 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 PTCD3Q96EY7 689 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 FRG2BQ96QU4 278 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 MENTQ9BUN1 341 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCBD2Q9H0N5 130 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 DUSP15Q9H1R2 295 aaPredicted RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 XKR8Q9H6D3 395 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 CAAP1Q9H8G2 361 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TAAR2Q9P1P5 351 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TAC3Q9UHF0 121 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRAMEF33A0A0G2JMD5 474 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 LOC100653049A0A140TA62 436 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 A0A1W2PR77 199 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 A6NCN8 305 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 CFAP73A6NFT4 308 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLC28A1O00337 649 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 SLC22A2O15244 555 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 KRT34O76011 436 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 PDYNP01213 254 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 CD22P20273 847 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 VARSP26640 1264 aaKnown RBP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 PIK3R1P27986 724 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 ADSLP30566 484 aaPredicted RBP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 CPA2P48052 419 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 NEK2P51955 445 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 HMGCS1Q01581 520 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 C1orf61Q13536 156 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 DDX39BQ13838 428 aaKnown RBP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 PAGE2BQ5JRK9 111 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 TJAP1Q5JTD0 557 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 C6orf136Q5SQH8 315 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 CATSPEREQ5SY80 951 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 GRHL2Q6ISB3 625 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 OGFOD2Q6N063 350 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 Q6ZSR9 355 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 TRIM46Q7Z4K8 759 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 SPATA19Q7Z5L4 167 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 POU5F2Q8N7G0 328 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 LINC01555Q8NAE3 123 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 SETD7Q8WTS6 366 aaKnown RBP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 PPP3R2Q96LZ3 170 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 EFCAB11Q9BUY7 163 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 ZNF385DQ9H6B1 395 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 KIR3DX1Q9H7L2 352 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRMT8Q9NR22 394 aaPredicted RBP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 ZNF624Q9P2J8 865 aaPredicted RBP9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 SH2B3Q9UQQ2 575 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCDHGA11Q9Y5H2 935 aa9.18□□□□□ -0.94
SMPD4P1-203ENST00000443839 TMEM221A6NGB7 291 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 M0R296 226 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PSMD12O00232 456 aaPredicted RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 LSM1O15116 133 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 BCAT2O15382 392 aaPredicted RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CELA2BP08218 269 aaPredicted RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 ALDOCP09972 364 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRR35P0CG20 571 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 IDO1P14902 403 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PKLRP30613 574 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 AFF3P51826 1226 aaKnown RBP9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 C21orf59P57076 290 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 ERVK-8P63133 956 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 MXRA7P84157 204 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 PLCL1Q15111 1095 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 AP5B1Q2VPB7 878 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 WLSQ5T9L3 541 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 ATG9BQ674R7 924 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 NXPE4Q6UWF7 544 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 LCTLQ6UWM7 567 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 RNF165Q6ZSG1 346 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 C17orf64Q86WR6 236 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 SFRP1Q8N474 314 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR2L8Q8NGY9 312 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 LCN9Q8WX39 176 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 DNASE2BQ8WZ79 361 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 REPS1Q96D71 796 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 C1orf50Q9BV19 199 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 LRRC61Q9BV99 259 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 EHD1Q9H4M9 534 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 YY1AP1Q9H869 796 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 ICKQ9UPZ9 632 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 H0YIV9 168 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 VIPP01282 170 aa9.17□□□□□ -0.94
SMPD4P1-203ENST00000443839 CSF2P04141 144 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms