RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GPS1Q13098 491 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 NR6A1Q15406 480 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 TRIP13Q15645 432 aaPredicted RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 EIF2S3LQ2VIR3 472 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 PLEKHN1Q494U1 663 aaPredicted RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 CCSMST1Q4G0I0 132 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ZNF662Q6ZS27 426 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 RNF44Q7L0R7 432 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 CISD2Q8N5K1 135 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 OR9A1PQ8NGU1 263 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 SMPDL3AQ92484 453 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 RERGQ96A58 199 aaPredicted RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 FAM136AQ96C01 138 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 MIEF2Q96C03 454 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 SNRNP40Q96DI7 357 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 CNDP1Q96KN2 507 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ZNF285Q96NJ3 590 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 BIRC8Q96P09 236 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 SPSB2Q99619 263 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ZFYVE21Q9BQ24 234 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ACAT2Q9BWD1 397 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 LHPPQ9H008 270 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 SLC22A11Q9NSA0 550 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 INTS10Q9NVR2 710 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 CTSFQ9UBX1 484 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 ZNF282Q9UDV7 671 aaPredicted RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 ZC3H7BQ9UGR2 993 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 CDC14AQ9UNH5 594 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 KLK4Q9Y5K2 254 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 MAU2Q9Y6X3 613 aa11.26□□□□□ -0.61
TTC28-203ENST00000442232 UTP20O75691 2785 aaKnown RBP11.26□□□□□ -0.61
TTC28-203ENST00000442232 MDC1Q14676 2089 aaKnown RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 HEATR5BQ9P2D3 2071 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 SOCS6O14544 535 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ALOX12BO75342 701 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 USP1O94782 785 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 MATN4O95460 622 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ONECUT2O95948 504 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 KRT14P02533 472 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ANXA5P08758 320 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 PKMP14618 531 aaKnown RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 ACPPP15309 386 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 CXCR2P25025 360 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ARNTP27540 789 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 CXCR5P32302 372 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 DHX34Q14147 1143 aaKnown RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 ARHGAP19Q14CB8 494 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 KLHL38Q2WGJ6 581 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ZNF470Q6ECI4 717 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 FRMPD2BQ6IN97 320 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 COX15Q7KZN9 410 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ADCK2Q7Z695 626 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 CILP2Q8IUL8 1156 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 PRSS58Q8IYP2 241 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 GABPB2Q8TAK5 448 aaPredicted RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 PPP4R1Q8TF05 950 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ZNF669Q96BR6 464 aaPredicted RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 C19orf60Q96EN9 201 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 NAP1L3Q99457 506 aaPredicted RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 DPH7Q9BTV6 452 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 YIPF2Q9BWQ6 316 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 XAB2Q9HCS7 855 aaKnown RBP11.25□□□□□ -0.61
TTC28-203ENST00000442232 ENAMQ9NRM1 1142 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 ASF1BQ9NVP2 202 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 HS3ST3B1Q9Y662 390 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 HIVEP3Q5T1R4 2406 aa11.25□□□□□ -0.61
TTC28-203ENST00000442232 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.24□□□□□ -0.61
TTC28-203ENST00000442232 TCRBV7S3A2A0A539 114 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 MAGEB16A2A368 324 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 OR2A25A4D2G3 310 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 KRT87PA6NCN2 255 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 ANKUB1A6NFN9 424 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 ARHGEF33A8MVX0 844 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 MYO1CO00159 1063 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 MASP2O00187 686 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 SEMA7AO75326 666 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 SYF2O95926 243 aaKnown RBP11.24□□□□□ -0.61
TTC28-203ENST00000442232 HPP00738 406 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 PNLIPRP1P54315 467 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 KLC1Q07866 573 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
TTC28-203ENST00000442232 GBX1Q14549 363 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 KCNJ11Q14654 390 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 HIF1AQ16665 826 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 THEMIS2Q5TEJ8 643 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 SUSD1Q6UWL2 747 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 KIRREL2Q6UWL6 708 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 Q6ZS92 163 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 NEK10Q6ZWH5 1172 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 CSNK1A1LQ8N752 337 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 OR2A1Q8NGT9 310 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 DNAJB14Q8TBM8 379 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 STT3BQ8TCJ2 826 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 CALML6Q8TD86 181 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 MVB12AQ96EY5 273 aa11.24□□□□□ -0.61
TTC28-203ENST00000442232 THOC3Q96J01 351 aaKnown RBP11.24□□□□□ -0.61
TTC28-203ENST00000442232 C5orf34Q96MH7 638 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms