RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SLC32A1Q9H598 525 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 C6orf106Q9H6K1 298 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 WSB2Q9NYS7 404 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 LRRK1Q38SD2 2015 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 PIKFYVEQ9Y2I7 2098 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 KATNA1O75449 491 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 RSL1D1O76021 490 aaKnown RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 APBB3O95704 486 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 CHEK2O96017 543 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 TFAP2AP05549 437 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 HTR1BP28222 390 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 SLC5A2P31639 672 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 BTKQ06187 659 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 NDUFAF5Q5TEU4 345 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 KIAA0895LQ68EN5 471 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 LRRC70Q7Z2Q7 622 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 EFL1Q7Z2Z2 1120 aaKnown RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 NET1Q7Z628 596 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 SYVN1Q86TM6 617 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 ERI1Q8IV48 349 aaKnown RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 SPEM1Q8N4L4 309 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 FBXO15Q8NCQ5 510 aaPredicted RBP7.85□□□□□ -1.15
CCDC39-201ENST00000442201 OR52B6Q8NGF0 335 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 FBXL8Q96CD0 374 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 BMFQ96LC9 184 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 TIMM29Q9BSF4 260 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 GPR174Q9BXC1 333 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 TPSD1Q9BZJ3 242 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 OR52A5Q9H2C5 316 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 TM7SF3Q9NS93 570 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 DNAJC15Q9Y5T4 150 aa7.85□□□□□ -1.15
CCDC39-201ENST00000442201 IFRD1O00458 451 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SDHDO14521 159 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 KLHL41O60662 606 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 KCNJ13O60928 360 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 KRT36O76013 467 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 C1orf105O95561 183 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 FUCA1P04066 466 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 UROSP10746 265 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ACP5P13686 325 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 NCF2P19878 526 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PCSK6P29122 969 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PRDX3P30048 256 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 BDKRB1P46663 353 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 NFATC4Q14934 902 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PTCHD3Q3KNS1 767 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 LSM12Q3MHD2 195 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 UGT3A2Q3SY77 523 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 KANK2Q63ZY3 851 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 METRNLQ641Q3 311 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 XKR5Q6UX68 686 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 UNC5DQ6UXZ4 953 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PDZD3Q86UT5 571 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PJA1Q8NG27 643 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CEP70Q8NHQ1 597 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CHPT1Q8WUD6 406 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CLDN23Q96B33 292 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 KCNA7Q96RP8 456 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 UHRF1Q96T88 793 aaPredicted RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 NUSAP1Q9BXS6 441 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 FGF22Q9HCT0 170 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SAR1AQ9NR31 198 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 DDX18Q9NVP1 670 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ACSL5Q9ULC5 683 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ERVK-11Q9UQG0 969 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ASF1AQ9Y294 204 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CA5BQ9Y2D0 317 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 NUMA1Q14980 2115 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 A0A1B0GTL3 188 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PRAMEF26H0Y7S4 382 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 H0Y8X5 98 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 WDR47O94967 919 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 OR4F21O95013 312 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 IGHV4-34P06331 123 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SLC35G4P0C7Q5 338 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 M6PRP20645 277 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ACADLP28330 430 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 NUDT1P36639 197 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SLC6A12P48065 614 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 HNRNPFP52597 415 aaKnown RBP7.84□□□□□ -1.15
CCDC39-201ENST00000442201 FOXA1P55317 472 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ERVPABLB-1P60509 514 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PFN3P60673 137 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 YPEL5P62699 121 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 PYCR3Q53H96 274 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 FAM91A1Q658Y4 838 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 MILR1Q7Z6M3 343 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 SPARTQ8N0X7 666 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CADM3Q8N126 398 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 CDYL2Q8N8U2 506 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ANGPTL6Q8NI99 470 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 TWIST2Q8WVJ9 160 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 RLN3Q8WXF3 142 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 C19orf60Q96EN9 201 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 WDR92Q96MX6 357 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ATG10Q9H0Y0 220 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 OSGEPL1Q9H4B0 414 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 MEAF6Q9HAF1 191 aa7.84□□□□□ -1.15
CCDC39-201ENST00000442201 ARMCX1Q9P291 453 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms